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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-r.4   7471982   poly [ADP-ribose] polymerase 1 
 ppo-u.5   7471982   poly [ADP-ribose] polymerase 1 
 ppo-m.4   7471982   poly [ADP-ribose] polymerase 1 
 ppo-u.5   7455989   poly [ADP-ribose] polymerase 2 
 gma-u.5   100815900   poly [ADP-ribose] polymerase 1 
 gma-u.5   100800968   poly [ADP-ribose] polymerase 1 
 mtr-u.5   25499226   poly [ADP-ribose] polymerase 1 
 ath-u.5   PARP1   poly(ADP-ribose) polymerase 2 
 bra-r.6   103867889   poly [ADP-ribose] polymerase 1 
 vvi-u.5   100261796   poly [ADP-ribose] polymerase 1 
 ghi-r.1   107955901   poly [ADP-ribose] polymerase 1 
 ghi-r.1   107924403   poly [ADP-ribose] polymerase 1 
 bna-r.1   106451383   poly [ADP-ribose] polymerase 1 
 bna-r.1   106387307   poly [ADP-ribose] polymerase 1 
 cit-r.1   102621976   poly [ADP-ribose] polymerase 1 
 sly-u.5   101247901   poly [ADP-ribose] polymerase 1 
 sot-r.1   102598568   poly [ADP-ribose] polymerase 1 
 nta-r.1   107799072   poly [ADP-ribose] polymerase 1-like 
 nta-r.1   107765431   poly [ADP-ribose] polymerase 1 
 osa-u.5   4343013   poly [ADP-ribose] polymerase 1-like 
 zma-u.5   103647201   poly (ADP-ribose) polymerase 1 
 tae-r.2   123187381   poly [ADP-ribose] polymerase 1 
 tae-r.2   123180018   poly [ADP-ribose] polymerase 1 
 tae-r.2   123105286   poly [ADP-ribose] polymerase 1 
 hvu-r.1   123448172   poly [ADP-ribose] polymerase 1 
 sbi-r.1   8057336   poly [ADP-ribose] polymerase 1 
 sbi-r.1   110431537   poly [ADP-ribose] polymerase 2-like 
 bdi-r.1   100828525   poly [ADP-ribose] polymerase 1 

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Top 50 coexpressed genes to 7471982 (ppo-r.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7471982 (ppo-r.4 coexpression data)

CoexMap"7471982"


ppoLOC7471982 | Entrez gene ID : 7471982    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 1 1 1 2 2 1 1 1 2 1 1 3 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03410 [list] [network] Base excision repair (63 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0003950 [list] [network] NAD+ poly-ADP-ribosyltransferase activity  (13 genes)  IEA  
GO:0051287 [list] [network] NAD binding  (105 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2205 genes)  IEA  
Protein XP_002302058.4 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cysk 2,  chlo 1,  mito 1,  chlo_mito 1,  golg_plas 1  (predict for XP_002302058.4)
Subcellular
localization
TargetP
other 4  (predict for XP_002302058.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-r.4
for
7471982
ppo-u.5
for
7471982
ppo-m.4
for
7471982
ppo-u.5
for
7455989
gma-u.5
for
100815900
gma-u.5
for
100800968
mtr-u.5
for
25499226
ath-u.5
for
PARP1
bra-r.6
for
103867889
vvi-u.5
for
100261796
ghi-r.1
for
107955901
ghi-r.1
for
107924403
bna-r.1
for
106451383
bna-r.1
for
106387307
cit-r.1
for
102621976
sly-u.5
for
101247901
sot-r.1
for
102598568
nta-r.1
for
107799072
nta-r.1
for
107765431
osa-u.5
for
4343013
zma-u.5
for
103647201
tae-r.2
for
123187381
tae-r.2
for
123180018
tae-r.2
for
123105286
hvu-r.1
for
123448172
sbi-r.1
for
8057336
sbi-r.1
for
110431537
bdi-r.1
for
100828525


Ortholog ID: 7935
Species ppo ppo gma gma mtr ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi sbi bdi
Symbol LOC7471982 LOC7455989 LOC100815900 LOC100800968 LOC25499226 PARP1 LOC103867889 LOC100261796 LOC107955901 LOC107924403 LOC106451383 LOC106387307 LOC102621976 LOC101247901 LOC102598568 LOC107799072 LOC107765431 LOC4343013 LOC103647201 LOC123187381 LOC123180018 LOC123105286 LOC123448172 LOC8057336 LOC110431537 LOC100828525
Function* poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 2 poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 1 poly(ADP-ribose) polymerase 2 poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 1-like poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 1-like poly (ADP-ribose) polymerase 1 poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 1 poly [ADP-ribose] polymerase 2-like poly [ADP-ribose] polymerase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00910 Nitrogen metabolism 2
ppo01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 2
gma00670 One carbon pool by folate 2
gma00790 Folate biosynthesis 2
gma01232 Nucleotide metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 4
ath03440 Homologous recombination 4
ath03030 DNA replication 3
ath03460 Fanconi anemia pathway 2
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 3
ghi03060 Protein export 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi03022 Basal transcription factors 3
ghi03420 Nucleotide excision repair 3
ghi04626 Plant-pathogen interaction 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03410 Base excision repair 3
sly03030 DNA replication 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03030 DNA replication 3
zma03410 Base excision repair 3
zma00270 Cysteine and methionine metabolism 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03410 Base excision repair 3
tae03440 Homologous recombination 3
tae03450 Non-homologous end-joining 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03410 Base excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 5
tae03013 Nucleocytoplasmic transport 5
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 4
bdi03013 Nucleocytoplasmic transport 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7471982 7455989 100815900 100800968 25499226 817690 103867889 100261796 107955901 107924403 106451383 106387307 102621976 101247901 102598568 107799072 107765431 4343013 103647201 123187381 123180018 123105286 123448172 8057336 110431537 100828525
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