ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-r.4	7475801	uncharacterized LOC7475801
ppo-u.5	7475801	uncharacterized LOC7475801
gma-u.5	100780584	uncharacterized LOC100780584
mtr-u.5	11423949	uncharacterized LOC11423949
ath-u.5	AT1G35660	erythroid differentiation factor-like protein
bra-r.6	103871269	uncharacterized LOC103871269
vvi-u.5	100252053	uncharacterized LOC100252053
ghi-r.1	107914042	uncharacterized LOC107914042
bna-r.1	106346050	uncharacterized LOC106346050
bna-r.1	106406313	uncharacterized LOC106406313
cit-r.1	102623236	uncharacterized LOC102623236
sly-u.5	101251689	uncharacterized LOC101251689
sot-r.1	102594247	uncharacterized LOC102594247
nta-r.1	107781912	uncharacterized LOC107781912
nta-r.1	107789148	uncharacterized LOC107789148
osa-u.5	4324767	uncharacterized LOC4324767
zma-u.5	103650944	Erythroid differentiation-related factor 1-like protein
tae-r.2	123079924	uncharacterized LOC123079924
tae-r.2	123071585	uncharacterized LOC123071585
tae-r.2	123062762	uncharacterized LOC123062762
hvu-r.1	123444765	uncharacterized LOC123444765
sbi-r.1	8060997	uncharacterized LOC8060997
bdi-r.1	100837056	uncharacterized LOC100837056

Annotation

functional annotation

KEGG

GO BP

GO:0045893 [list] [network] positive regulation of DNA-templated transcription

(292 genes)

IEA

GO CC

GO MF

Protein

XP_024447069.2 [sequence] [blastp]
XP_024447070.2 [sequence] [blastp]
XP_024447071.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto 1	(predict for XP_024447069.2)
nucl 9, cyto 1	(predict for XP_024447070.2)
nucl 9, cyto 1	(predict for XP_024447071.2)

Subcellular
localization
TargetP

chlo 7	(predict for XP_024447069.2)
chlo 8, other 3	(predict for XP_024447070.2)
chlo 7	(predict for XP_024447071.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-r.4 for 7475801	ppo-u.5 for 7475801	gma-u.5 for 100780584	mtr-u.5 for 11423949	ath-u.5 for AT1G35660	bra-r.6 for 103871269	vvi-u.5 for 100252053	ghi-r.1 for 107914042	bna-r.1 for 106346050	bna-r.1 for 106406313	cit-r.1 for 102623236	sly-u.5 for 101251689	sot-r.1 for 102594247	nta-r.1 for 107781912	nta-r.1 for 107789148	osa-u.5 for 4324767	zma-u.5 for 103650944	tae-r.2 for 123079924	tae-r.2 for 123071585	tae-r.2 for 123062762	hvu-r.1 for 123444765	sbi-r.1 for 8060997	bdi-r.1 for 100837056

Ortholog

Ortholog ID: 11787

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC7475801

uncharacterized LOC100780584

uncharacterized LOC11423949

erythroid differentiation factor-like protein

uncharacterized LOC103871269

uncharacterized LOC100252053

uncharacterized LOC107914042

uncharacterized LOC106346050

uncharacterized LOC106406313

uncharacterized LOC102623236

uncharacterized LOC101251689

uncharacterized LOC102594247

uncharacterized LOC107781912

uncharacterized LOC107789148

uncharacterized LOC4324767

Erythroid differentiation-related factor 1-like protein

uncharacterized LOC123079924

uncharacterized LOC123071585

uncharacterized LOC123062762

uncharacterized LOC123444765

uncharacterized LOC8060997

uncharacterized LOC100837056

Coexmap

Please wait a moment.

Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	4
gma03013	Nucleocytoplasmic transport	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00562	Inositol phosphate metabolism	2
ghi04070	Phosphatidylinositol signaling system	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	3
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	3
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2
sly03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03083	Polycomb repressive complex	2
nta03250	Viral life cycle - HIV-1	2
nta00561	Glycerolipid metabolism	2
nta00564	Glycerophospholipid metabolism	2
nta04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03083	Polycomb repressive complex	4
nta03250	Viral life cycle - HIV-1	4
nta00561	Glycerolipid metabolism	2
nta00564	Glycerophospholipid metabolism	2
nta04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

7475801

100780584

11423949

840468

103871269

100252053

107914042

106346050

106406313

102623236

101251689

102594247

107781912

107789148

4324767

103650944

123079924

123071585

123062762

123444765

8060997

100837056

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7475801 (ppo-r.4 coexpression data)

Top 50 enrichment test to 7475801 (ppo-r.4 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	1	1	1	1	2	1	1	1	2	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7475801 (ppo-r.4 coexpression data)

Top 50 enrichment test to 7475801 (ppo-r.4 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**