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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-r.4   7488930   probable RNA methyltransferase At5g51130 
 ppo-u.5   7488930   probable RNA methyltransferase At5g51130 
 ppo-m.4   7488930   probable RNA methyltransferase At5g51130 
 gma-u.5   100500304   S-adenosylmethionine-dependent methyltransferases superfamily protein 
 mtr-u.5   11412377   probable RNA methyltransferase At5g51130 
 ath-u.5   AT5G51130   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 bra-r.6   103857196   probable RNA methyltransferase At5g51130 
 vvi-u.5   100261137   probable RNA methyltransferase At5g51130 
 ghi-r.1   107933007   probable RNA methyltransferase At5g51130 
 ghi-r.1   107930782   probable RNA methyltransferase At5g51130 
 bna-r.1   125585438   probable RNA methyltransferase At5g51130 
 bna-r.1   106406882   probable RNA methyltransferase At5g51130 
 bna-r.1   106387920   probable RNA methyltransferase At5g51130 
 cit-r.1   102607054   probable RNA methyltransferase At5g51130 
 sly-u.5   101255199   probable RNA methyltransferase At5g51130 
 sot-r.1   102582951   probable RNA methyltransferase At5g51130 
 nta-r.1   107763349   putative RNA methyltransferase At5g51130 
 nta-r.1   107809636   putative RNA methyltransferase At5g51130 
 nta-r.1   107797299   putative RNA methyltransferase At5g51130 
 osa-u.5   4346188   probable RNA methyltransferase At5g51130 
 zma-u.5   103654422   probable RNA methyltransferase At5g51130 
 zma-u.5   103652738   probable RNA methyltransferase At5g51130 
 tae-r.2   123152201   probable RNA methyltransferase At5g51130 
 tae-r.2   123152188   probable RNA methyltransferase At5g51130 
 tae-r.2   123157062   probable RNA methyltransferase At5g51130 
 hvu-r.1   123408741   probable RNA methyltransferase At5g51130 
 hvu-r.1   123408742   probable RNA methyltransferase At5g51130 
 sbi-r.1   8055278   probable RNA methyltransferase At5g51130 
 sbi-r.1   8060569   probable RNA methyltransferase At5g51130 
 bdi-r.1   100828615   probable RNA methyltransferase At5g51130 
 cre-r.1   CHLRE_15g636450v5   uncharacterized protein 

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Top 50 coexpressed genes to 7488930 (ppo-r.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7488930 (ppo-r.4 coexpression data)

CoexMap"7488930"


ppoLOC7488930 | Entrez gene ID : 7488930    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 1 1 1 2 3 1 1 1 3 1 2 3 2 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0040031 [list] [network] snRNA modification  (6 genes)  IEA  
GO CC
GO MF
GO:0017069 [list] [network] snRNA binding  (24 genes)  IEA  
GO:0008171 [list] [network] O-methyltransferase activity  (47 genes)  IEA  
GO:0008173 [list] [network] RNA methyltransferase activity  (53 genes)  IEA  
Protein XP_002325013.4 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 3  (predict for XP_002325013.4)
Subcellular
localization
TargetP
other 9  (predict for XP_002325013.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-r.4
for
7488930
ppo-u.5
for
7488930
ppo-m.4
for
7488930
gma-u.5
for
100500304
mtr-u.5
for
11412377
ath-u.5
for
AT5G51130
bra-r.6
for
103857196
vvi-u.5
for
100261137
ghi-r.1
for
107933007
ghi-r.1
for
107930782
bna-r.1
for
125585438
bna-r.1
for
106406882
bna-r.1
for
106387920
cit-r.1
for
102607054
sly-u.5
for
101255199
sot-r.1
for
102582951
nta-r.1
for
107763349
nta-r.1
for
107809636
nta-r.1
for
107797299
osa-u.5
for
4346188
zma-u.5
for
103654422
zma-u.5
for
103652738
tae-r.2
for
123152201
tae-r.2
for
123152188
tae-r.2
for
123157062
hvu-r.1
for
123408741
hvu-r.1
for
123408742
sbi-r.1
for
8055278
sbi-r.1
for
8060569
bdi-r.1
for
100828615
cre-r.1
for
CHLRE_15g636450v5


Ortholog ID: 6372
Species ppo gma mtr ath bra vvi ghi ghi bna bna cit sly sot nta nta nta osa zma zma tae tae tae hvu hvu sbi sbi bdi cre
Symbol LOC7488930 LOC100500304 LOC11412377 AT5G51130 LOC103857196 LOC100261137 LOC107933007 LOC107930782 LOC125585438 LOC106387920 LOC102607054 LOC101255199 LOC102582951 LOC107763349 LOC107809636 LOC107797299 LOC4346188 LOC103654422 LOC103652738 LOC123152201 LOC123152188 LOC123157062 LOC123408741 LOC123408742 LOC8055278 LOC8060569 LOC100828615 CHLRE_15g636450v5
Function* probable RNA methyltransferase At5g51130 S-adenosylmethionine-dependent methyltransferases superfamily protein probable RNA methyltransferase At5g51130 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 putative RNA methyltransferase At5g51130 putative RNA methyltransferase At5g51130 putative RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 probable RNA methyltransferase At5g51130 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00330 Arginine and proline metabolism 2
zma00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 2
tae00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03420 Nucleotide excision repair 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03440 Homologous recombination 2
sbi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
bdi01232 Nucleotide metabolism 2
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7488930 100500304 11412377 835187 103857196 100261137 107933007 107930782 125585438 106387920 102607054 101255199 102582951 107763349 107809636 107797299 4346188 103654422 103652738 123152201 123152188 123157062 123408741 123408742 8055278 8060569 100828615 5726183
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