ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-r.4	7489609	probable receptor-like protein kinase At5g59700
ppo-u.5	7489609	probable receptor-like protein kinase At5g59700
ppo-m.4	7489609	probable receptor-like protein kinase At5g59700
ppo-u.5	7489281	receptor-like protein kinase HERK 1
ppo-u.5	7485732	receptor-like protein kinase HERK 1
gma-u.5	100778698	receptor-like protein kinase HERK 1
gma-u.5	100305414	protein kinase
gma-u.5	100806488	receptor-like protein kinase HERK 1
mtr-u.5	11408742	receptor-like protein kinase HERK 1
mtr-u.5	11417590	receptor-like protein kinase HERK 1
ath-u.5	HERK1	hercules receptor kinase 1
ath-u.5	AT5G59700	Protein kinase superfamily protein
bra-r.6	103845390	probable receptor-like protein kinase At5g59700
bra-r.6	103873622	receptor-like protein kinase HERK 1
vvi-u.5	100251868	receptor-like protein kinase HERK 1
vvi-u.5	100265586	probable receptor-like protein kinase At5g59700
ghi-r.1	107932488	receptor-like protein kinase HERK 1
ghi-r.1	107932930	receptor-like protein kinase HERK 1
ghi-r.1	107938425	receptor-like protein kinase HERK 1
bna-r.1	111204396	receptor-like protein kinase HERK 1
bna-r.1	106347534	receptor-like protein kinase HERK 1
bna-r.1	106392475	probable receptor-like protein kinase At5g59700
cit-r.1	102615450	probable receptor-like protein kinase At5g59700
cit-r.1	102614958	receptor-like protein kinase HERK 1
sly-u.5	101248487	receptor-like protein kinase HERK 1
sly-u.5	101255400	receptor-like protein kinase HERK 1
sly-u.5	101258128	receptor-like protein kinase HERK 1
sot-r.1	102604283	receptor-like protein kinase HERK 1
sot-r.1	102596871	receptor-like protein kinase HERK 1
sot-r.1	102606389	receptor-like protein kinase HERK 1
nta-r.1	107758937	receptor-like protein kinase HERK 1
nta-r.1	107771309	receptor-like protein kinase HERK 1
nta-r.1	107825264	receptor-like protein kinase HERK 1
osa-u.5	4340933	receptor-like protein kinase HERK 1
osa-u.5	4337896	receptor-like protein kinase HERK 1
zma-u.5	100193715	Putative receptor-like protein kinase family protein
zma-u.5	100384323	uncharacterized LOC100384323
tae-r.2	123180618	receptor-like protein kinase HERK 1
tae-r.2	123147844	receptor-like protein kinase HERK 1
tae-r.2	123039254	receptor-like protein kinase HERK 1
hvu-r.1	123426354	receptor-like protein kinase HERK 1
hvu-r.1	123413286	receptor-like protein kinase HERK 1
sbi-r.1	8071202	receptor-like protein kinase HERK 1
sbi-r.1	8058434	receptor-like protein kinase HERK 1
bdi-r.1	100839805	receptor-like protein kinase HERK 1
bdi-r.1	100838088	receptor-like protein kinase HERK 1

Top 50 coexpressed genes to 7489609 (ppo-r.4 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7489609 (ppo-r.4 coexpression data)

CoexMap"7489609"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0046777 [list] [network] protein autophosphorylation

(77 genes)

IEA

GO CC

GO:0009506 [list] [network] plasmodesma	(117 genes)	IEA
GO:0005886 [list] [network] plasma membrane	(1125 genes)	IEA

GO MF

GO:0004714 [list] [network] transmembrane receptor protein tyrosine kinase activity	(20 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2559 genes)	IEA

Protein

XP_002315260.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, E.R. 2, nucl 1, mito 1, extr 1

(predict for XP_002315260.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_002315260.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-r.4 for 7489609	ppo-u.5 for 7489609	ppo-m.4 for 7489609	ppo-u.5 for 7489281	ppo-u.5 for 7485732	gma-u.5 for 100778698	gma-u.5 for 100305414	gma-u.5 for 100806488	mtr-u.5 for 11408742	mtr-u.5 for 11417590	ath-u.5 for HERK1	ath-u.5 for AT5G59700	bra-r.6 for 103845390	bra-r.6 for 103873622	vvi-u.5 for 100251868	vvi-u.5 for 100265586	ghi-r.1 for 107932488	ghi-r.1 for 107932930	ghi-r.1 for 107938425	bna-r.1 for 111204396	bna-r.1 for 106347534	bna-r.1 for 106392475	cit-r.1 for 102615450	cit-r.1 for 102614958	sly-u.5 for 101248487	sly-u.5 for 101255400	sly-u.5 for 101258128	sot-r.1 for 102604283	sot-r.1 for 102596871	sot-r.1 for 102606389	nta-r.1 for 107758937	nta-r.1 for 107771309	nta-r.1 for 107825264	osa-u.5 for 4340933	osa-u.5 for 4337896	zma-u.5 for 100193715	zma-u.5 for 100384323	tae-r.2 for 123180618	tae-r.2 for 123147844	tae-r.2 for 123039254	hvu-r.1 for 123426354	hvu-r.1 for 123413286	sbi-r.1 for 8071202	sbi-r.1 for 8058434	bdi-r.1 for 100839805	bdi-r.1 for 100838088

Ortholog

Ortholog ID: 2417

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

HERK1

Function^*

probable receptor-like protein kinase At5g59700