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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18094964   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 ppo-r.4   18094964   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 gma-u.5   100810127   uroporphyrinogen-III C-methyltransferase 
 gma-u.5   100781598   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 mtr-u.5   25497997   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 mtr-u.5   11424663   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 ath-u.5   UPM1   urophorphyrin methylase 1 
 bra-r.6   103864030   uroporphyrinogen-III C-methyltransferase 
 vvi-u.5   100852901   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 ghi-r.1   107916337   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 ghi-r.1   121208609   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 bna-r.1   111213173   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 bna-r.1   106372704   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 cit-r.1   102607259   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 sly-u.5   101261158   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 sot-r.1   102578636   siroheme synthase 
 nta-r.1   107787724   siroheme synthase-like 
 nta-r.1   107769353   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 osa-u.5   4326671   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 zma-u.5   542745   siroheme uroporphyrinogen methyltransferase 1 
 zma-u.5   100217089   urophorphyrin methylase 1 
 tae-r.2   123070182   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 tae-r.2   123061548   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 tae-r.2   123078627   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 hvu-r.1   123443927   S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic 
 sbi-r.1   8084878   uroporphyrinogen-III C-methyltransferase 
 bdi-r.1   100843265   uroporphyrinogen-III C-methyltransferase 
 cre-r.1   CHLRE_09g396401v5   uncharacterized protein 

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Top 50 coexpressed genes to 18094964 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18094964 (ppo-u.5 coexpression data)

CoexMap"18094964"


ppoLOC18094964 | Entrez gene ID : 18094964    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 2 1 1 1 2 2 1 1 1 2 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00860 [list] [network] Porphyrin metabolism (65 genes)
pop01240 [list] [network] Biosynthesis of cofactors (298 genes)
GO BP
GO:0019354 [list] [network] siroheme biosynthetic process  (1 genes)  IEA  
GO CC
GO MF
GO:0004851 [list] [network] uroporphyrin-III C-methyltransferase activity  (1 genes)  IEA  
Protein XP_006369436.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  mito 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for XP_006369436.3)
Subcellular
localization
TargetP
chlo 3,  scret 3  (predict for XP_006369436.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18094964
ppo-r.4
for
18094964
gma-u.5
for
100810127
gma-u.5
for
100781598
mtr-u.5
for
25497997
mtr-u.5
for
11424663
ath-u.5
for
UPM1
bra-r.6
for
103864030
vvi-u.5
for
100852901
ghi-r.1
for
107916337
ghi-r.1
for
121208609
bna-r.1
for
111213173
bna-r.1
for
106372704
cit-r.1
for
102607259
sly-u.5
for
101261158
sot-r.1
for
102578636
nta-r.1
for
107787724
nta-r.1
for
107769353
osa-u.5
for
4326671
zma-u.5
for
542745
zma-u.5
for
100217089
tae-r.2
for
123070182
tae-r.2
for
123061548
tae-r.2
for
123078627
hvu-r.1
for
123443927
sbi-r.1
for
8084878
bdi-r.1
for
100843265
cre-r.1
for
CHLRE_09g396401v5


Ortholog ID: 9130
Species ppo gma gma mtr mtr ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC18094964 LOC100810127 LOC100781598 LOC25497997 LOC11424663 UPM1 LOC103864030 LOC100852901 LOC107916337 LOC121208609 LOC111213173 LOC106372704 LOC102607259 LOC101261158 LOC102578636 LOC107787724 LOC107769353 LOC4326671 LOC542745 LOC100217089 LOC123070182 LOC123061548 LOC123078627 LOC123443927 LOC8084878 LOC100843265 CHLRE_09g396401v5
Function* S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic uroporphyrinogen-III C-methyltransferase S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic urophorphyrin methylase 1 uroporphyrinogen-III C-methyltransferase S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic siroheme synthase siroheme synthase-like S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic siroheme uroporphyrinogen methyltransferase 1 urophorphyrin methylase 1 S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic uroporphyrinogen-III C-methyltransferase uroporphyrinogen-III C-methyltransferase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 4
ppo00910 Nitrogen metabolism 3
ppo01310 Nitrogen cycle 3
ppo00030 Pentose phosphate pathway 3
ppo00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 5
gma01310 Nitrogen cycle 5
gma01200 Carbon metabolism 4
gma00030 Pentose phosphate pathway 3
gma00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 5
gma00910 Nitrogen metabolism 5
gma01310 Nitrogen cycle 5
gma00030 Pentose phosphate pathway 4
gma00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr01200 Carbon metabolism 3
mtr00910 Nitrogen metabolism 3
mtr01310 Nitrogen cycle 3
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr01200 Carbon metabolism 3
mtr00195 Photosynthesis 2
mtr00860 Porphyrin metabolism 2
mtr00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00030 Pentose phosphate pathway 4
ath00480 Glutathione metabolism 4
ath00910 Nitrogen metabolism 4
ath00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 5
bra00910 Nitrogen metabolism 4
bra01310 Nitrogen cycle 4
bra00030 Pentose phosphate pathway 3
bra00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00910 Nitrogen metabolism 3
vvi01240 Biosynthesis of cofactors 3
vvi01310 Nitrogen cycle 2
vvi00760 Nicotinate and nicotinamide metabolism 2
vvi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 3
ghi00480 Glutathione metabolism 3
ghi01200 Carbon metabolism 3
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 3
ghi00480 Glutathione metabolism 3
ghi01200 Carbon metabolism 3
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 6
bna00030 Pentose phosphate pathway 4
bna00480 Glutathione metabolism 4
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 6
bna00030 Pentose phosphate pathway 4
bna00480 Glutathione metabolism 4
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00910 Nitrogen metabolism 2
cit01310 Nitrogen cycle 2
cit00030 Pentose phosphate pathway 2
cit00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00920 Sulfur metabolism 7
sly01320 Sulfur cycle 6
sly01230 Biosynthesis of amino acids 5
sly01240 Biosynthesis of cofactors 4
sly01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 8
sot01230 Biosynthesis of amino acids 6
sot00270 Cysteine and methionine metabolism 4
sot00910 Nitrogen metabolism 4
sot00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 4
nta00910 Nitrogen metabolism 3
nta01310 Nitrogen cycle 3
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 4
nta00910 Nitrogen metabolism 3
nta01310 Nitrogen cycle 3
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 4
osa00910 Nitrogen metabolism 4
osa01310 Nitrogen cycle 4
osa01240 Biosynthesis of cofactors 3
osa00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 3
zma00910 Nitrogen metabolism 3
zma01310 Nitrogen cycle 3
zma01200 Carbon metabolism 3
zma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 3
zma00910 Nitrogen metabolism 3
zma01310 Nitrogen cycle 3
zma00920 Sulfur metabolism 3
zma01320 Sulfur cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00920 Sulfur metabolism 9
tae01320 Sulfur cycle 9
tae01240 Biosynthesis of cofactors 5
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00920 Sulfur metabolism 9
tae01320 Sulfur cycle 9
tae01240 Biosynthesis of cofactors 5
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00920 Sulfur metabolism 9
tae01320 Sulfur cycle 9
tae01240 Biosynthesis of cofactors 5
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu01230 Biosynthesis of amino acids 3
hvu00030 Pentose phosphate pathway 2
hvu00480 Glutathione metabolism 2
hvu00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00030 Pentose phosphate pathway 3
sbi01200 Carbon metabolism 3
sbi00195 Photosynthesis 3
sbi00910 Nitrogen metabolism 3
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00910 Nitrogen metabolism 3
bdi01310 Nitrogen cycle 3
bdi01200 Carbon metabolism 3
bdi01240 Biosynthesis of cofactors 2
bdi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00920 Sulfur metabolism 6
cre02010 ABC transporters 4
cre01200 Carbon metabolism 4
cre00270 Cysteine and methionine metabolism 2
cre00543 Exopolysaccharide biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 18094964 100810127 100781598 25497997 11424663 834085 103864030 100852901 107916337 121208609 111213173 106372704 102607259 101261158 102578636 107787724 107769353 4326671 542745 100217089 123070182 123061548 123078627 123443927 8084878 100843265 5720333
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