ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	18098142	uncharacterized LOC18098142
ppo-r.4	18098142	uncharacterized LOC18098142
ppo-u.5	7474899	uncharacterized LOC7474899
gma-u.5	100802245	uncharacterized LOC100802245
gma-u.5	100803861	uncharacterized LOC100803861
mtr-u.5	11433907	uncharacterized LOC11433907
ath-u.5	AT4G38280	integral membrane hemolysin-III-like protein
bra-r.6	103835129	uncharacterized LOC103835129
vvi-u.5	100264584	uncharacterized LOC100264584
vvi-u.5	100262451	uncharacterized LOC100262451
vvi-u.5	100250489	uncharacterized LOC100250489
ghi-r.1	107908612	uncharacterized LOC107908612
ghi-r.1	107922662	uncharacterized LOC107922662
ghi-r.1	107925342	uncharacterized LOC107925342
bna-r.1	106381981	basic-leucine zipper transcription factor A
bna-r.1	106359969	uncharacterized LOC106359969
cit-r.1	102617605	uncharacterized LOC102617605
sly-u.5	101256042	uncharacterized LOC101256042
sly-u.5	101259630	uncharacterized LOC101259630
sot-r.1	102599247	uncharacterized LOC102599247
sot-r.1	102597921	uncharacterized LOC102597921
nta-r.1	107829605	uncharacterized LOC107829605
nta-r.1	107771183	uncharacterized LOC107771183
nta-r.1	142173259	uncharacterized LOC142173259
osa-u.5	4347778	putative GPI-anchored protein pfl2
osa-u.5	4335012	uncharacterized LOC4335012
zma-u.5	100278236	uncharacterized LOC100278236
zma-u.5	100272339	uncharacterized LOC100272339
tae-r.2	123043118	golgin subfamily A member 6-like protein 22
tae-r.2	123051014	golgin subfamily A member 6-like protein 22
tae-r.2	123104720	serine/threonine-protein kinase WNK4
hvu-r.1	123451858	mucin-1-like
hvu-r.1	123431516	golgin subfamily A member 6-like protein 6
sbi-r.1	8065994	uncharacterized LOC8065994
bdi-r.1	100825460	uncharacterized LOC100825460
bdi-r.1	104581897	stress response protein NST1

Top 50 coexpressed genes to 18098142 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 18098142 (ppo-u.5 coexpression data)

CoexMap"18098142"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_006384839.3 [sequence] [blastp]
XP_024455002.2 [sequence] [blastp]
XP_024455003.2 [sequence] [blastp]
XP_024455004.2 [sequence] [blastp]
XP_024455005.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, chlo 1, vacu 1	(predict for XP_006384839.3)
nucl 9, chlo 1, cyto 1	(predict for XP_024455002.2)
nucl 9, chlo 1, vacu 1	(predict for XP_024455003.2)
nucl 9, chlo 1, vacu 1	(predict for XP_024455004.2)
nucl 5, cyto_nucl 4, cyto 1, chlo 1, cysk 1	(predict for XP_024455005.2)

Subcellular
localization
TargetP

other 8	(predict for XP_006384839.3)
other 8	(predict for XP_024455002.2)
other 8	(predict for XP_024455003.2)
other 8	(predict for XP_024455004.2)
scret 5	(predict for XP_024455005.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18098142	ppo-r.4 for 18098142	ppo-u.5 for 7474899	gma-u.5 for 100802245	gma-u.5 for 100803861	mtr-u.5 for 11433907	ath-u.5 for AT4G38280	bra-r.6 for 103835129	vvi-u.5 for 100264584	vvi-u.5 for 100262451	vvi-u.5 for 100250489	ghi-r.1 for 107908612	ghi-r.1 for 107922662	ghi-r.1 for 107925342	bna-r.1 for 106381981	bna-r.1 for 106359969	cit-r.1 for 102617605	sly-u.5 for 101256042	sly-u.5 for 101259630	sot-r.1 for 102599247	sot-r.1 for 102597921	nta-r.1 for 107829605	nta-r.1 for 107771183	nta-r.1 for 142173259	osa-u.5 for 4347778	osa-u.5 for 4335012	zma-u.5 for 100278236	zma-u.5 for 100272339	tae-r.2 for 123043118	tae-r.2 for 123051014	tae-r.2 for 123104720	hvu-r.1 for 123451858	hvu-r.1 for 123431516	sbi-r.1 for 8065994	bdi-r.1 for 100825460	bdi-r.1 for 104581897

Ortholog

Ortholog ID: 4967

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC18098142

uncharacterized LOC7474899

uncharacterized LOC100802245

uncharacterized LOC100803861

uncharacterized LOC11433907

integral membrane hemolysin-III-like protein

uncharacterized LOC103835129

uncharacterized LOC100264584

uncharacterized LOC100262451

uncharacterized LOC100250489

uncharacterized LOC107908612

uncharacterized LOC107925342

uncharacterized LOC107939382

basic-leucine zipper transcription factor A

uncharacterized LOC106359969

uncharacterized LOC102617605

uncharacterized LOC101256042

uncharacterized LOC101259630

uncharacterized LOC102599247

uncharacterized LOC102597921

uncharacterized LOC107829605

uncharacterized LOC107771183

uncharacterized LOC142173259

putative GPI-anchored protein pfl2

uncharacterized LOC4335012

uncharacterized LOC100278236

uncharacterized LOC100272339

golgin subfamily A member 6-like protein 22

mucin-1-like

golgin subfamily A member 6-like protein 6

uncharacterized LOC8065994

uncharacterized LOC100825460

stress response protein NST1

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	2
ppo03040	Spliceosome	2
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2
gma03008	Ribosome biogenesis in eukaryotes	2
gma03083	Polycomb repressive complex	2
gma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4
mtr03083	Polycomb repressive complex	2
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	7
bra00020	Citrate cycle (TCA cycle)	5
bra00270	Cysteine and methionine metabolism	5
bra00566	Sulfoquinovose metabolism	5
bra00620	Pyruvate metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	4
ghi00061	Fatty acid biosynthesis	2
ghi00071	Fatty acid degradation	2
ghi01212	Fatty acid metabolism	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	4
ghi00061	Fatty acid biosynthesis	2
ghi00071	Fatty acid degradation	2
ghi01212	Fatty acid metabolism	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	6
bna04626	Plant-pathogen interaction	6
bna03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	6
bna04626	Plant-pathogen interaction	6
bna04145	Phagosome	2
bna04517	IgSF CAM signaling	2
bna04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2
sly03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00230	Purine metabolism	2
nta00240	Pyrimidine metabolism	2
nta00760	Nicotinate and nicotinamide metabolism	2
nta01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4
nta00230	Purine metabolism	2
nta00240	Pyrimidine metabolism	2
nta00480	Glutathione metabolism	2
nta01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03018	RNA degradation	2
osa03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	2
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	3
bdi03015	mRNA surveillance pathway	3
bdi03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

18098142

7474899

100802245

100803861

11433907

829985

103835129

100264584

100262451

100250489

107908612

107925342

107939382

106381981

106359969

102617605

101256042

101259630

102599247

102597921

107829605

107771183

142173259

4347778

4335012

100278236

100272339

123043118

123051014

123186965

123451858

123431516

8065994

100825460

104581897

The preparation time of this page was 0.2 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	1	1	1	3	3	2	1	2	2	3	2	2	3	2	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18098142 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18098142 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**