ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	18098604	GTP-binding protein SAR1A
ppo-r.4	18098604	GTP-binding protein SAR1A
ppo-u.5	7485916	GTP-binding protein SAR1A
ppo-u.5	7482266	GTP-binding protein SAR1A
ppo-u.5	7481702	GTP-binding protein SAR1A
gma-u.5	100500031	uncharacterized LOC100500031
gma-u.5	100526929	GTP-binding protein SAR1A
gma-u.5	100788066	GTP-binding protein SAR1A
mtr-u.5	11427896	GTP-binding protein SAR1A
mtr-u.5	25499653	GTP-binding protein SAR1A
mtr-u.5	11410239	GTP-binding protein SAR1A
ath-u.5	SAR1B	secretion-associated RAS 1B
ath-u.5	AT3G62560	Ras-related small GTP-binding family protein
ath-u.5	SAR2	secretion-associated RAS super family 2
bra-r.6	103836780	GTP-binding protein SAR1A
bra-r.6	103838691	GTP-binding protein SAR1B-like
bra-r.6	103847650	GTP-binding protein SAR1B-like
vvi-u.5	100256889	GTP-binding protein SAR1A
vvi-u.5	100248702	GTP-binding protein SAR1A
ghi-r.1	107918739	GTP-binding protein SAR1B
ghi-r.1	107910911	GTP-binding protein SAR1A
ghi-r.1	107896616	GTP-binding protein SAR1A
bna-r.1	125577657	GTP-binding protein SAR1A
bna-r.1	106378215	GTP-binding protein SAR1B-like
cit-r.1	102626272	GTP-binding protein SAR1A-like
cit-r.1	102625214	GTP-binding protein SAR1A-like
sly-u.5	101267027	small COPII coat GTPase SAR1A
sly-u.5	101244997	GTP-binding protein SAR1A-like
sly-u.5	101244805	small COPII coat GTPase SAR1A
sot-r.1	102602834	GTP-binding protein SAR1A-like
sot-r.1	102577699	small GTP-binding protein Sar1BNt-like protein
sot-r.1	102595918	GTP-binding protein SAR1A-like
nta-r.1	107790375	small COPII coat GTPase SAR1A
nta-r.1	107781632	small COPII coat GTPase SAR1B
nta-r.1	107817985	small COPII coat GTPase SAR1B
osa-u.5	4352510	small COPII coat GTPase SAR1A
osa-u.5	4340541	GTP-binding protein SAR2
osa-u.5	4327708	GTP-binding protein SAR1A
zma-u.5	100279736	SAR-like protein
zma-u.5	103652863	GTP-binding protein SAR2
zma-u.5	542172	uncharacterized LOC542172
tae-r.2	123069742	GTP-binding protein SAR1A
tae-r.2	123061174	GTP-binding protein SAR1A
tae-r.2	123060956	GTP-binding protein SAR1A
hvu-r.1	123400003	GTP-binding protein SAR1A
hvu-r.1	123410876	GTP-binding protein SAR1A-like
hvu-r.1	123443387	GTP-binding protein SAR1A-like
sbi-r.1	8057824	GTP-binding protein SAR1A
sbi-r.1	8071718	GTP-binding protein SAR1A
sbi-r.1	8085805	GTP-binding protein SAR1A
bdi-r.1	100834596	GTP-binding protein SAR1A
bdi-r.1	100826223	GTP-binding protein SAR1A
bdi-r.1	100823524	GTP-binding protein SAR1A
cre-r.1	CHLRE_11g468300v5	uncharacterized protein

Top 50 coexpressed genes to 18098604 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 18098604 (ppo-u.5 coexpression data)

CoexMap"18098604"

[Cytoscape]

Annotation

functional annotation

KEGG

pop04141 [list] [network] Protein processing in endoplasmic reticulum (286 genes)

GO BP

GO:0070863 [list] [network] positive regulation of protein exit from endoplasmic reticulum	(6 genes)	IEA
GO:0003400 [list] [network] regulation of COPII vesicle coating	(10 genes)	IEA
GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport	(109 genes)	IEA
GO:0016050 [list] [network] vesicle organization	(116 genes)	IEA
GO:0061024 [list] [network] membrane organization	(235 genes)	IEA
GO:0006886 [list] [network] intracellular protein transport	(350 genes)	IEA

GO CC

GO:0030127 [list] [network] COPII vesicle coat	(25 genes)	IEA
GO:0070971 [list] [network] endoplasmic reticulum exit site	(25 genes)	IEA

GO MF

GO:0003924 [list] [network] GTPase activity	(264 genes)	IEA
GO:0005525 [list] [network] GTP binding	(290 genes)	IEA

Protein

XP_006382411.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, cyto_E.R. 4, chlo 3

(predict for XP_006382411.1)

Subcellular
localization
TargetP

scret 8

(predict for XP_006382411.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18098604	ppo-r.4 for 18098604	ppo-u.5 for 7485916	ppo-u.5 for 7482266	ppo-u.5 for 7481702	gma-u.5 for 100500031	gma-u.5 for 100526929	gma-u.5 for 100788066	mtr-u.5 for 11427896	mtr-u.5 for 25499653	mtr-u.5 for 11410239	ath-u.5 for SAR1B	ath-u.5 for AT3G62560	ath-u.5 for SAR2	bra-r.6 for 103836780	bra-r.6 for 103838691	bra-r.6 for 103847650	vvi-u.5 for 100256889	vvi-u.5 for 100248702	ghi-r.1 for 107918739	ghi-r.1 for 107910911	ghi-r.1 for 107896616	bna-r.1 for 125577657	bna-r.1 for 106378215	cit-r.1 for 102626272	cit-r.1 for 102625214	sly-u.5 for 101267027	sly-u.5 for 101244997	sly-u.5 for 101244805	sot-r.1 for 102602834	sot-r.1 for 102577699	sot-r.1 for 102595918	nta-r.1 for 107790375	nta-r.1 for 107781632	nta-r.1 for 107817985	osa-u.5 for 4352510	osa-u.5 for 4340541	osa-u.5 for 4327708	zma-u.5 for 100279736	zma-u.5 for 103652863	zma-u.5 for 542172	tae-r.2 for 123069742	tae-r.2 for 123061174	tae-r.2 for 123060956	hvu-r.1 for 123400003	hvu-r.1 for 123410876	hvu-r.1 for 123443387	sbi-r.1 for 8057824	sbi-r.1 for 8071718	sbi-r.1 for 8085805	bdi-r.1 for 100834596	bdi-r.1 for 100826223	bdi-r.1 for 100823524	cre-r.1 for CHLRE_11g468300v5

Ortholog

Ortholog ID: 693

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

SAR1B

SARA1A

Function^*

GTP-binding protein SAR1A

uncharacterized LOC100500031

GTP-binding protein SAR1A

GTP-binding protein SAR1A-like

GTP-binding protein SAR1A

secretion-associated RAS 1B

Ras-related small GTP-binding family protein

secretion-associated RAS super family 1

GTP-binding protein SAR1A

GTP-binding protein SAR1A-like

GTP-binding protein SAR1B

GTP-binding protein SAR1A

GTP-binding protein SAR1B

GTP-binding protein SAR1A

GTP-binding protein SAR1B-like

GTP-binding protein SAR1A-like

small COPII coat GTPase SAR1A

GTP-binding protein SAR1A-like

small COPII coat GTPase SAR1A

GTP-binding protein SAR1A-like

small GTP-binding protein Sar1BNt-like protein

GTP-binding protein SAR1A-like

small COPII coat GTPase SAR1B

small COPII coat GTPase SAR1A

GTP-binding protein SAR2

GTP-binding protein SAR1A

small COPII coat GTPase SAR1A

SAR-like protein

uncharacterized LOC542172

GTP-binding protein SAR1A

GTP-binding protein SAR1A-like

GTP-binding protein SAR1A

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	4
ppo03060	Protein export	2
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	6
ppo01230	Biosynthesis of amino acids	6
ppo00010	Glycolysis / Gluconeogenesis	5
ppo04141	Protein processing in endoplasmic reticulum	4
ppo00710	Carbon fixation by Calvin cycle	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	5
ppo04142	Lysosome	2
ppo00190	Oxidative phosphorylation	2
ppo04145	Phagosome	2
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	4
gma04016	MAPK signaling pathway - plant	4
gma04070	Phosphatidylinositol signaling system	4
gma04075	Plant hormone signal transduction	4
gma04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03020	RNA polymerase	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	17
gma04145	Phagosome	5
gma03060	Protein export	4
gma04626	Plant-pathogen interaction	2
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	10
mtr03060	Protein export	3
mtr04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	3
mtr04120	Ubiquitin mediated proteolysis	2
mtr03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	5
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	13
ath04145	Phagosome	7
ath03060	Protein export	5
ath04148	Efferocytosis	2
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	11
ath04145	Phagosome	4
ath03060	Protein export	2
ath04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00564	Glycerophospholipid metabolism	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	4
bra00564	Glycerophospholipid metabolism	3
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	6
bra03060	Protein export	3
bra04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	10
vvi04145	Phagosome	3
vvi03013	Nucleocytoplasmic transport	2
vvi04148	Efferocytosis	2
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	2
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	2
ghi03060	Protein export	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	10
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00030	Pentose phosphate pathway	2
ghi00051	Fructose and mannose metabolism	2
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	6
ghi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	6
bna04141	Protein processing in endoplasmic reticulum	4
bna04145	Phagosome	2
bna04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	6
bna04141	Protein processing in endoplasmic reticulum	4
bna03015	mRNA surveillance pathway	3
bna04145	Phagosome	2
bna04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	3
cit01250	Biosynthesis of nucleotide sugars	3
cit00541	Biosynthesis of various nucleotide sugars	2
cit00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	5
sly04141	Protein processing in endoplasmic reticulum	4
sly04145	Phagosome	3
sly00190	Oxidative phosphorylation	2
sly04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	6
sly04141	Protein processing in endoplasmic reticulum	4
sly03013	Nucleocytoplasmic transport	2
sly03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	5
sly04145	Phagosome	5
sly00190	Oxidative phosphorylation	4
sly04142	Lysosome	4
sly04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	6
sot00190	Oxidative phosphorylation	5
sot04142	Lysosome	5
sot04145	Phagosome	5
sot04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	6
sot03083	Polycomb repressive complex	5
sot04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04142	Lysosome	2
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	6
nta04145	Phagosome	6
nta04141	Protein processing in endoplasmic reticulum	4
nta04144	Endocytosis	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	7
nta04145	Phagosome	7
nta04141	Protein processing in endoplasmic reticulum	4
nta04142	Lysosome	3
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00520	Amino sugar and nucleotide sugar metabolism	3
osa01250	Biosynthesis of nucleotide sugars	3
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	4
zma04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	4
zma04141	Protein processing in endoplasmic reticulum	3
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	5
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01250	Biosynthesis of nucleotide sugars	3
tae03060	Protein export	2
tae04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	5
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01250	Biosynthesis of nucleotide sugars	3
tae03060	Protein export	2
tae04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	4
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	3
hvu04141	Protein processing in endoplasmic reticulum	2
hvu04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	4
sbi04141	Protein processing in endoplasmic reticulum	3
sbi00280	Valine, leucine and isoleucine degradation	3
sbi00410	beta-Alanine metabolism	3
sbi00640	Propanoate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	6
sbi03083	Polycomb repressive complex	3
sbi04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	3
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	5
bdi04016	MAPK signaling pathway - plant	2
bdi04070	Phosphatidylinositol signaling system	2
bdi04075	Plant hormone signal transduction	2
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	7
cre03060	Protein export	4

Expression

Expression pattern

Entrez Gene ID^*

7482266

7481702

7478907

100500031

100526929

100815670

11427896

25499653

11410239

842086

825430

837438

103836780

103858778

103871647

100256889

100248702

107896616

107927306

107946030

106435602

106438662

111202309

102625214

102625491

101267027

101244997

101244805

102602834

102577699

102595918

107781632

107817985

107814166

4340541

4327708

4326797

100279736

542172

100283241

123069742

123078217

123400003

123443387

123443643

8071718

8085805

8086324

100834596

100826223

100823524

5725046

The preparation time of this page was 0.1 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	3	3	3	3	2	3	2	2	3	3	3	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18098604 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18098604 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**