ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	18100063	uncharacterized LOC18100063
ppo-r.4	18100063	uncharacterized LOC18100063
gma-u.5	100814311	uncharacterized LOC100814311
gma-u.5	100813767	uncharacterized LOC100813767
gma-u.5	100790018	uncharacterized LOC100790018
mtr-u.5	120577169	uncharacterized LOC120577169
mtr-u.5	25483879	uncharacterized LOC25483879
ath-u.5	TRM27	nucleolin-like protein
ath-u.5	TRM28	histone-lysine N-methyltransferase SETD1B-like protein
bra-r.6	103855534	uncharacterized LOC103855534
bra-r.6	103847370	uncharacterized LOC103847370
bra-r.6	103865545	uncharacterized LOC103865545
vvi-u.5	100244201	uncharacterized LOC100244201
ghi-r.1	107928133	uncharacterized protein DDB_G0283697
ghi-r.1	107949465	uncharacterized LOC107949465
ghi-r.1	107935674	uncharacterized LOC107935674
bna-r.1	106453456	uncharacterized LOC106453456
bna-r.1	106352319	uncharacterized LOC106352319
bna-r.1	111204214	uncharacterized LOC111204214
cit-r.1	102615824	uncharacterized LOC102615824
sly-u.5	TRM27/28a	TONNEAU1 recruiting motif 27/28a
sly-u.5	TRM27/28b	TONNEAU1 recruiting motif 27/28b
sot-r.1	102590052	uncharacterized LOC102590052
sot-r.1	102598987	uncharacterized LOC102598987
nta-r.1	107815337	uncharacterized LOC107815337
nta-r.1	107774220	uncharacterized LOC107774220
nta-r.1	107760873	uncharacterized LOC107760873

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_006381308.3 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_006381308.3)

Subcellular
localization
TargetP

other 9

(predict for XP_006381308.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18100063	ppo-r.4 for 18100063	gma-u.5 for 100814311	gma-u.5 for 100813767	gma-u.5 for 100790018	mtr-u.5 for 120577169	mtr-u.5 for 25483879	ath-u.5 for TRM27	ath-u.5 for TRM28	bra-r.6 for 103855534	bra-r.6 for 103847370	bra-r.6 for 103865545	vvi-u.5 for 100244201	ghi-r.1 for 107928133	ghi-r.1 for 107949465	ghi-r.1 for 107935674	bna-r.1 for 106453456	bna-r.1 for 106352319	bna-r.1 for 111204214	cit-r.1 for 102615824	sly-u.5 for TRM27/28a	sly-u.5 for TRM27/28b	sot-r.1 for 102590052	sot-r.1 for 102598987	nta-r.1 for 107815337	nta-r.1 for 107774220	nta-r.1 for 107760873

Ortholog

Ortholog ID: 4883

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

Symbol

TRM27

TRM28

Function^*

uncharacterized LOC18100063

uncharacterized LOC100813767

uncharacterized LOC100790018

uncharacterized LOC100782984

uncharacterized LOC120577169

uncharacterized LOC25483879

nucleolin-like protein

histone-lysine N-methyltransferase SETD1B-like protein

uncharacterized LOC103855534

uncharacterized LOC103865545

uncharacterized LOC103867284

uncharacterized LOC100244201

uncharacterized protein DDB_G0283697

uncharacterized LOC107908711

zinc-regulated protein 8

uncharacterized BNAC03G20160D

nucleoprotein TPR-like

uncharacterized LOC102615824

TONNEAU1 recruiting motif 27/28a

TONNEAU1 recruiting motif 27/28b

uncharacterized LOC102590052

uncharacterized LOC102598987

uncharacterized LOC107815337

uncharacterized LOC107774220

uncharacterized LOC107760873

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	3
gma04075	Plant hormone signal transduction	3
gma00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	4
gma04075	Plant hormone signal transduction	4
gma02010	ABC transporters	2
gma04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2
ghi00905	Brassinosteroid biosynthesis	2
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00270	Cysteine and methionine metabolism	5
sot00670	One carbon pool by folate	4
sot01240	Biosynthesis of cofactors	3
sot04145	Phagosome	3
sot04517	IgSF CAM signaling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00230	Purine metabolism	2
nta00730	Thiamine metabolism	2
nta01232	Nucleotide metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00230	Purine metabolism	2
nta00730	Thiamine metabolism	2
nta01232	Nucleotide metabolism	2
nta01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

18100063

100813767

100790018

100782984

120577169

25483879

818216

831763

103855534

103865545

103867284

100244201

107928133

107908711

107905371

106349093

106392381

102615824

101267341

104644378

102590052

102598987

107815337

107774220

107760873

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 18100063 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18100063 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	sbi	osa	tae	hvu	zma	cre	bdi
Paralog	2	3	2	2	3	1	3	3	1	2	2	3	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18100063 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18100063 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**