ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	18100356	protein ELF4-LIKE 3
ppo-r.4	18100356	protein ELF4-LIKE 3
ppo-u.5	7475701	protein ELF4-LIKE 4
ppo-u.5	7490950	protein ELF4-LIKE 4
gma-u.5	100305734	uncharacterized LOC100305734
gma-u.5	100500360	uncharacterized LOC100500360
gma-u.5	100306717	uncharacterized LOC100306717
mtr-u.5	11424337	protein ELF4-LIKE 4
mtr-u.5	25486483	protein ELF4-LIKE 4
ath-u.5	ELF4-L3	ELF4-like 3
ath-u.5	ELF4-L4	ELF4-like 4
ath-u.5	ELF4-L2	ELF4-like 2
bra-r.6	103842749	protein ELF4-LIKE 4
bra-r.6	103831768	protein ELF4-LIKE 2
bra-r.6	103852793	protein ELF4-LIKE 2
vvi-u.5	100266924	protein ELF4-LIKE 4
ghi-r.1	107907111	protein ELF4-LIKE 3
ghi-r.1	107906044	protein ELF4-LIKE 4
bna-r.1	125591277	protein ELF4-LIKE 4-like
bna-r.1	106449643	protein ELF4-LIKE 2
bna-r.1	106346866	protein ELF4-LIKE 4
cit-r.1	102578003	ELF4-like protein
cit-r.1	102629127	protein ELF4-LIKE 4
cit-r.1	102629421	protein ELF4-LIKE 4
sly-u.5	101256688	protein ELF4-LIKE 3
sly-u.5	100316888	ELF4-like protein
sot-r.1	102587775	protein ELF4-LIKE 3
sot-r.1	107059158	protein ELF4-LIKE 3-like
sot-r.1	102577611	ELF4-like protein
osa-u.5	107278437	protein ELF4-LIKE 4
osa-u.5	4350949	protein ELF4-LIKE 4
osa-u.5	4345389	protein ELF4-LIKE 4
zma-u.5	100284666	protein ELF4-LIKE 4
zma-u.5	100284193	uncharacterized LOC100284193
zma-u.5	100281645	uncharacterized LOC100281645
tae-r.2	123085998	protein ELF4-LIKE 4
tae-r.2	123091861	protein ELF4-LIKE 4
tae-r.2	123096963	protein ELF4-LIKE 4
hvu-r.1	123448351	protein ELF4-LIKE 4-like
sbi-r.1	8068321	protein ELF4-LIKE 3
sbi-r.1	8080417	protein ELF4-LIKE 4
sbi-r.1	8056220	uncharacterized LOC8056220
bdi-r.1	100833201	protein ELF4-LIKE 4
bdi-r.1	100839739	protein ELF4-LIKE 4

Top 50 coexpressed genes to 18100356 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 18100356 (ppo-u.5 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

protein ELF4-LIKE 3

KEGG

GO BP

GO:0042753 [list] [network] positive regulation of circadian rhythm	(5 genes)	IEA
GO:0009649 [list] [network] entrainment of circadian clock	(9 genes)	IEA

GO CC

GO MF

Protein

XP_006381644.1 [sequence] [blastp]
XP_024458736.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto 1, extr 1	(predict for XP_006381644.1)
nucl 7, cyto 1, extr 1	(predict for XP_024458736.1)

Subcellular
localization
TargetP

other 8	(predict for XP_006381644.1)
other 8	(predict for XP_024458736.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18100356	ppo-r.4 for 18100356	ppo-u.5 for 7475701	ppo-u.5 for 7490950	gma-u.5 for 100305734	gma-u.5 for 100500360	gma-u.5 for 100306717	mtr-u.5 for 11424337	mtr-u.5 for 25486483	ath-u.5 for ELF4-L3	ath-u.5 for ELF4-L4	ath-u.5 for ELF4-L2	bra-r.6 for 103842749	bra-r.6 for 103831768	bra-r.6 for 103852793	vvi-u.5 for 100266924	ghi-r.1 for 107907111	ghi-r.1 for 107906044	bna-r.1 for 125591277	bna-r.1 for 106449643	bna-r.1 for 106346866	cit-r.1 for 102578003	cit-r.1 for 102629127	cit-r.1 for 102629421	sly-u.5 for 101256688	sly-u.5 for 100316888	sot-r.1 for 102587775	sot-r.1 for 107059158	sot-r.1 for 102577611	osa-u.5 for 107278437	osa-u.5 for 4350949	osa-u.5 for 4345389	zma-u.5 for 100284666	zma-u.5 for 100284193	zma-u.5 for 100281645	tae-r.2 for 123085998	tae-r.2 for 123091861	tae-r.2 for 123096963	hvu-r.1 for 123448351	sbi-r.1 for 8068321	sbi-r.1 for 8080417	sbi-r.1 for 8056220	bdi-r.1 for 100833201	bdi-r.1 for 100839739

Please wait a moment.

Ortholog

Ortholog ID: 1649

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

osa

zma

tae

hvu

sbi

bdi

Symbol

ELF4-L3

ELF4-L4

ELF4-L2

Function^*

protein ELF4-LIKE 3

protein ELF4-LIKE 4

uncharacterized LOC100305734

uncharacterized LOC100306717

protein ELF4-LIKE 3

protein ELF4-LIKE 4

ELF4-like 3

ELF4-like 4

ELF4-like 2

protein ELF4-LIKE 4

protein ELF4-LIKE 2

protein ELF4-LIKE 4

protein ELF4-LIKE 3

protein ELF4-LIKE 4

protein ELF4-LIKE 2

protein ELF4-LIKE 4

ELF4-like protein

protein ELF4-LIKE 4

protein ELF4-LIKE 3

ELF4-like protein

protein ELF4-LIKE 3

protein ELF4-LIKE 3-like

ELF4-like protein

protein ELF4-LIKE 4

protein ELF4-LIKE 3

uncharacterized LOC100284193

uncharacterized LOC100281645

early flowering 4

protein ELF4-LIKE 4

protein ELF4-LIKE 3

protein ELF4-LIKE 4-like

protein ELF4-LIKE 3

protein ELF4-LIKE 4

uncharacterized LOC8056220

protein ELF4-LIKE 4

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	6
ppo04145	Phagosome	3
ppo04517	IgSF CAM signaling	3
ppo04814	Motor proteins	3
ppo00440	Phosphonate and phosphinate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03020	RNA polymerase	2
gma03420	Nucleotide excision repair	2
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	4
gma03083	Polycomb repressive complex	2
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04145	Phagosome	3
gma04130	SNARE interactions in vesicular transport	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	2
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	6
ath00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	2
cit04145	Phagosome	2
cit04148	Efferocytosis	2
cit04517	IgSF CAM signaling	2
cit04518	Integrin signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	3
sot04141	Protein processing in endoplasmic reticulum	2
sot04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2
sot00270	Cysteine and methionine metabolism	2
sot00920	Sulfur metabolism	2
sot01200	Carbon metabolism	2
sot01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	8
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2
sbi03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	4
bdi00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	2

Expression

Expression pattern

Entrez Gene ID^*

18100356

7475701

7490950

100305734

100306717

100817992

11424337

25486483

815182

838318

843595

103842749

103831768

103872531

100266924

107907111

107929889

106346866

106354230

106430260

102578003

102629127

102629421

101256688

100316888

102587775

107059158

102577611

107278437

4345389

4333090

100284193

100281645

100279754

123091861

123096963

123121442

123448351

8068321

8080417

8056220

100833201

100839739

The preparation time of this page was 0.2 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	osa	zma	tae	hvu	sbi	bdi	nta	cre
Paralog	4	3	2	3	3	1	2	3	3	2	3	3	3	3	1	3	2	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18100356 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18100356 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**