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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18102016   chromatin modification-related protein eaf-1 
 ppo-r.4   18102016   chromatin modification-related protein eaf-1 
 ppo-u.5   7478560   chromatin modification-related protein eaf-1 
 gma-u.5   100814877   chromatin modification-related protein eaf-1 
 gma-u.5   100814445   altered inheritance of mitochondria protein 3 
 mtr-u.5   25491955   trithorax group protein osa 
 vvi-u.5   100250222   chromatin modification-related protein eaf-1 
 ghi-r.1   107949954   mediator of RNA polymerase II transcription subunit 15 
 ghi-r.1   107886031   nuclear receptor coactivator 6 
 ghi-r.1   107887564   histone-lysine N-methyltransferase 2D 
 cit-r.1   102624934   tubulin beta-2 chain 
 sly-u.5   101249008   uncharacterized LOC101249008 
 sot-r.1   102583939   trithorax group protein osa-like 
 nta-r.1   107800166   uncharacterized LOC107800166 
 nta-r.1   107762919   uncharacterized LOC107762919 
 osa-u.5   4351542   glutenin, high molecular weight subunit DX5 
 zma-u.5   100384168   uncharacterized LOC100384168 
 zma-u.5   100216556   uncharacterized LOC100216556 
 tae-r.2   123120172   altered inheritance of mitochondria protein 3 
 tae-r.2   123111141   trithorax group protein osa 
 tae-r.2   123102989   altered inheritance of mitochondria protein 3 
 hvu-r.1   123398184   trithorax group protein osa-like 
 sbi-r.1   8084876   chromatin modification-related protein eaf-1 
 bdi-r.1   100827924   trithorax group protein osa 

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Top 50 coexpressed genes to 18102016 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18102016 (ppo-u.5 coexpression data)

CoexMap"18102016"


ppoLOC18102016 | Entrez gene ID : 18102016    
Species ppo gma mtr vvi ghi cit sly sot nta osa zma tae hvu sbi bdi ath bna bra cre
Paralog 3 2 1 1 3 1 1 1 2 1 2 3 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_006379033.3 [sequence] [blastp]
XP_024463901.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_006379033.3)
nucl 10  (predict for XP_024463901.2)
Subcellular
localization
TargetP
other 8  (predict for XP_006379033.3)
other 8  (predict for XP_024463901.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18102016
ppo-r.4
for
18102016
ppo-u.5
for
7478560
gma-u.5
for
100814877
gma-u.5
for
100814445
mtr-u.5
for
25491955
vvi-u.5
for
100250222
ghi-r.1
for
107949954
ghi-r.1
for
107886031
ghi-r.1
for
107887564
cit-r.1
for
102624934
sly-u.5
for
101249008
sot-r.1
for
102583939
nta-r.1
for
107800166
nta-r.1
for
107762919
osa-u.5
for
4351542
zma-u.5
for
100384168
zma-u.5
for
100216556
tae-r.2
for
123120172
tae-r.2
for
123111141
tae-r.2
for
123102989
hvu-r.1
for
123398184
sbi-r.1
for
8084876
bdi-r.1
for
100827924


Ortholog ID: 11564
Species ppo ppo gma gma mtr vvi ghi ghi ghi cit sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC18102016 LOC7478560 LOC100814877 LOC100814445 LOC25491955 LOC100250222 LOC107949954 LOC107886031 LOC107887564 LOC102624934 LOC101249008 LOC102583939 LOC107800166 LOC107762919 LOC4351542 LOC100384168 LOC100216556 LOC123120172 LOC123111141 LOC123102989 LOC123398184 LOC8084876 LOC100827924
Function* chromatin modification-related protein eaf-1 chromatin modification-related protein eaf-1 chromatin modification-related protein eaf-1 altered inheritance of mitochondria protein 3 trithorax group protein osa chromatin modification-related protein eaf-1 mediator of RNA polymerase II transcription subunit 15 nuclear receptor coactivator 6 histone-lysine N-methyltransferase 2D tubulin beta-2 chain uncharacterized LOC101249008 trithorax group protein osa-like uncharacterized LOC107800166 uncharacterized LOC107762919 glutenin, high molecular weight subunit DX5 uncharacterized LOC100384168 uncharacterized LOC100216556 altered inheritance of mitochondria protein 3 trithorax group protein osa altered inheritance of mitochondria protein 3 trithorax group protein osa-like chromatin modification-related protein eaf-1 trithorax group protein osa
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03018 RNA degradation 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03460 Fanconi anemia pathway 2
ghi03018 RNA degradation 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03018 RNA degradation 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03013 Nucleocytoplasmic transport 2
cit03015 mRNA surveillance pathway 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00230 Purine metabolism 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta00230 Purine metabolism 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
bdi03018 RNA degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 18102016 7478560 100814877 100814445 25491955 100250222 107949954 107886031 107887564 102624934 101249008 102583939 107800166 107762919 4351542 100384168 100216556 123120172 123111141 123102989 123398184 8084876 100827924
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