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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18104478   GRAS family protein RAM1 
 ppo-r.4   18104478   GRAS family protein RAM1 
 nta-r.1   107807703   GRAS family protein RAM1-like 
 nta-r.1   107769865   GRAS family protein RAM1-like 
 hvu-r.1   123426746   scarecrow-like protein 23 

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Top 50 coexpressed genes to 18104478 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18104478 (ppo-u.5 coexpression data)

CoexMap"18104478"


ppoLOC18104478 | Entrez gene ID : 18104478    
Species ppo nta hvu osa sot sly cit ath bna ghi bdi sbi gma mtr bra tae vvi zma cre
Paralog 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (847 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1363 genes)  IEA  
Protein XP_006376315.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_006376315.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006376315.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18104478
ppo-r.4
for
18104478
nta-r.1
for
107807703
nta-r.1
for
107769865
hvu-r.1
for
123426746


Ortholog ID: 12107
Species ppo nta nta hvu
Symbol LOC18104478 LOC107807703 LOC107769865 LOC123426746
Function* GRAS family protein RAM1 GRAS family protein RAM1-like GRAS family protein RAM1-like scarecrow-like protein 23
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
nta04146 Peroxisome 2
nta03083 Polycomb repressive complex 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
nta04146 Peroxisome 2
nta03083 Polycomb repressive complex 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00670 One carbon pool by folate 4
hvu01240 Biosynthesis of cofactors 4
hvu00270 Cysteine and methionine metabolism 3
hvu01230 Biosynthesis of amino acids 3
hvu00999 Biosynthesis of various plant secondary metabolites 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 18104478 107807703 107769865 123426746
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