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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18104882   uncharacterized LOC18104882 
 ppo-r.4   18104882   uncharacterized LOC18104882 
 gma-u.5   100782129   trimethylguanosine synthase 
 mtr-u.5   11428036   trimethylguanosine synthase 
 ath-u.5   AT1G30550   S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 
 ath-u.5   AT1G45231   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-u.5   AT1G30545   S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 
 bra-r.6   103828904   trimethylguanosine synthase 
 bra-r.6   103833434   trimethylguanosine synthase 
 bra-r.6   103848369   trimethylguanosine synthase 
 vvi-u.5   100262697   uncharacterized LOC100262697 
 vvi-u.5   100262065   uncharacterized LOC100262065 
 ghi-r.1   107910222   trimethylguanosine synthase 
 bna-r.1   125575297   trimethylguanosine synthase-like 
 bna-r.1   106392237   trimethylguanosine synthase 
 cit-r.1   102608303   uncharacterized LOC102608303 
 sly-u.5   101266167   uncharacterized LOC101266167 
 sly-u.5   101263590   uncharacterized LOC101263590 
 sot-r.1   102606264   uncharacterized LOC102606264 
 sot-r.1   102588042   trimethylguanosine synthase 
 nta-r.1   107819562   uncharacterized LOC107819562 
 nta-r.1   107825078   uncharacterized LOC107825078 
 nta-r.1   107830514   uncharacterized LOC107830514 
 osa-u.5   4333042   uncharacterized LOC4333042 
 zma-u.5   100277845   uncharacterized LOC100277845 
 tae-r.2   123149185   trimethylguanosine synthase 
 tae-r.2   123183334   trimethylguanosine synthase 
 hvu-r.1   123408988   trimethylguanosine synthase-like 
 hvu-r.1   123452415   uncharacterized LOC123452415 
 sbi-r.1   8080440   uncharacterized LOC8080440 
 bdi-r.1   100828859   trimethylguanosine synthase 
 bdi-r.1   100844736   trimethylguanosine synthase 
 bdi-r.1   104581625   uncharacterized LOC104581625 
 cre-r.1   CHLRE_06g290800v5   uncharacterized protein 

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Top 50 coexpressed genes to 18104882 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18104882 (ppo-u.5 coexpression data)

CoexMap"18104882"


ppoLOC18104882 | Entrez gene ID : 18104882    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 3 3 2 1 2 1 2 2 3 1 1 2 2 1 3 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0036261 [list] [network] 7-methylguanosine cap hypermethylation  (1 genes)  IEA  
GO:0009452 [list] [network] 7-methylguanosine RNA capping  (6 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0071164 [list] [network] RNA cap trimethylguanosine synthase activity  (1 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024440006.2 [sequence] [blastp]
XP_024440007.2 [sequence] [blastp]
XP_024440009.2 [sequence] [blastp]
XP_024440010.2 [sequence] [blastp]
XP_024440011.2 [sequence] [blastp]
XP_024440012.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_024440006.2)
nucl 9  (predict for XP_024440007.2)
chlo 6,  mito 2,  nucl 1  (predict for XP_024440009.2)
nucl 9,  chlo 1,  cyto 1  (predict for XP_024440010.2)
nucl 9,  chlo 1,  cyto 1  (predict for XP_024440011.2)
nucl 7,  cyto 1,  chlo 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_024440012.2)
Subcellular
localization
TargetP
other 8  (predict for XP_024440006.2)
other 8  (predict for XP_024440007.2)
mito 1  (predict for XP_024440009.2)
other 8  (predict for XP_024440010.2)
other 8  (predict for XP_024440011.2)
other 8  (predict for XP_024440012.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18104882
ppo-r.4
for
18104882
gma-u.5
for
100782129
mtr-u.5
for
11428036
ath-u.5
for
AT1G30550
ath-u.5
for
AT1G45231
ath-u.5
for
AT1G30545
bra-r.6
for
103828904
bra-r.6
for
103833434
bra-r.6
for
103848369
vvi-u.5
for
100262697
vvi-u.5
for
100262065
ghi-r.1
for
107910222
bna-r.1
for
125575297
bna-r.1
for
106392237
cit-r.1
for
102608303
sly-u.5
for
101266167
sly-u.5
for
101263590
sot-r.1
for
102606264
sot-r.1
for
102588042
nta-r.1
for
107819562
nta-r.1
for
107825078
nta-r.1
for
107830514
osa-u.5
for
4333042
zma-u.5
for
100277845
tae-r.2
for
123149185
tae-r.2
for
123183334
hvu-r.1
for
123408988
hvu-r.1
for
123452415
sbi-r.1
for
8080440
bdi-r.1
for
100828859
bdi-r.1
for
100844736
bdi-r.1
for
104581625
cre-r.1
for
CHLRE_06g290800v5


Ortholog ID: 2859
Species ppo gma mtr ath ath ath bra bra bra vvi vvi ghi bna bna cit sly sly sot sot nta nta nta osa zma tae hvu hvu sbi bdi bdi cre
Symbol LOC18104882 LOC100782129 LOC11428036 AT1G30550 AT1G45231 AT1G30545 LOC103828904 LOC103833434 LOC103868442 LOC100262697 LOC100262065 LOC107910222 LOC111210505 LOC106392098 LOC102608303 LOC101266167 LOC101263590 LOC102606264 LOC102588042 LOC107819562 LOC107825078 LOC107832327 LOC4333042 LOC100277845 LOC123149185 LOC123408988 LOC123452415 LOC8080440 LOC100828859 LOC100844736 CHLRE_06g290800v5
Function* uncharacterized LOC18104882 trimethylguanosine synthase trimethylguanosine synthase S-adenosyl-L-methionine-dependent methyltransferase superfamily protein S-adenosyl-L-methionine-dependent methyltransferases superfamily protein S-adenosyl-L-methionine-dependent methyltransferase superfamily protein trimethylguanosine synthase trimethylguanosine synthase trimethylguanosine synthase uncharacterized LOC100262697 uncharacterized LOC100262065 trimethylguanosine synthase trimethylguanosine synthase-like trimethylguanosine synthase-like uncharacterized LOC102608303 uncharacterized LOC101266167 uncharacterized LOC101263590 uncharacterized LOC102606264 trimethylguanosine synthase uncharacterized LOC107819562 uncharacterized LOC107825078 uncharacterized LOC107832327 uncharacterized LOC4333042 uncharacterized LOC100277845 trimethylguanosine synthase trimethylguanosine synthase-like uncharacterized LOC123452415 uncharacterized LOC8080440 trimethylguanosine synthase trimethylguanosine synthase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03020 RNA polymerase 2
vvi03420 Nucleotide excision repair 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03008 Ribosome biogenesis in eukaryotes 2
tae03010 Ribosome 2
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
sbi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 18104882 100782129 11428036 839935 841092 28717281 103828904 103833434 103868442 100262697 100262065 107910222 111210505 106392098 102608303 101266167 101263590 102606264 102588042 107819562 107825078 107832327 4333042 100277845 123149185 123408988 123452415 8080440 100828859 100844736 5721086
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