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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18104895   pentatricopeptide repeat-containing protein At2g04860 
 ppo-r.4   18104895   pentatricopeptide repeat-containing protein At2g04860 
 gma-u.5   100787089   pentatricopeptide repeat-containing protein At2g04860 
 mtr-u.5   11431817   pentatricopeptide repeat-containing protein At2g04860 
 ath-u.5   AT2G04860   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103860319   pentatricopeptide repeat-containing protein At2g04860 
 vvi-u.5   100250665   pentatricopeptide repeat-containing protein At2g04860 
 ghi-r.1   107922427   pentatricopeptide repeat-containing protein At2g04860 

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Top 50 coexpressed genes to 18104895 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18104895 (ppo-u.5 coexpression data)

CoexMap"18104895"


ppoLOC18104895 | Entrez gene ID : 18104895    
Species ppo gma mtr ath bra vvi ghi cre nta hvu bna tae bdi osa zma sly cit sot sbi
Paralog 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (863 genes)  IEA  
GO CC
GO MF
GO:0004556 [list] [network] alpha-amylase activity  (5 genes)  IEA  
GO:0005509 [list] [network] calcium ion binding  (301 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024440574.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  plas 2,  nucl 1,  extr 1,  vacu 1,  mito_plas 1  (predict for XP_024440574.2)
Subcellular
localization
TargetP
chlo 3  (predict for XP_024440574.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18104895
ppo-r.4
for
18104895
gma-u.5
for
100787089
mtr-u.5
for
11431817
ath-u.5
for
AT2G04860
bra-r.6
for
103860319
vvi-u.5
for
100250665
ghi-r.1
for
107922427


Ortholog ID: 15806
Species ppo gma mtr ath bra vvi ghi
Symbol LOC18104895 LOC100787089 LOC11431817 AT2G04860 LOC103860319 LOC100250665 LOC107922427
Function* pentatricopeptide repeat-containing protein At2g04860 pentatricopeptide repeat-containing protein At2g04860 pentatricopeptide repeat-containing protein At2g04860 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g04860 pentatricopeptide repeat-containing protein At2g04860 pentatricopeptide repeat-containing protein At2g04860
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 18104895 100787089 11431817 815032 103860319 100250665 107922427
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