ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	atpF	ATP synthase CF0 B subunit
ppo-r.4	atpF	ATP synthase CF0 B subunit
gma-u.5	atpF	ATPase subunit I
mtr-u.5	atpF	ATP synthase CF0 B subunit
ath-u.5	atpF	ATP synthase CF0 B subunit
vvi-u.5	atpF	ATPase subunit I
ghi-r.1	atpF	ATPase subunit I
cit-r.1	atpF	ATP synthase CF0 B subunit
sly-u.5	atpF	ATP synthase CF0 subunit I
sot-r.1	atpF	ATP synthase CF0 B subunit
nta-r.1	atpF	ATPase subunit I
osa-u.5	atpF	ATP synthase CF0 B subunit
zma-u.5	atpF	ATP synthase CF0 B subunit
hvu-r.1	atpF	ATP synthase CF0 B subunit
sbi-r.1	atpF	ATP synthase CF0 B subunit
bdi-r.1	atpF	ATP synthase CF0 B subunit

functional annotation

KEGG

pop00190 [list] [network] Oxidative phosphorylation (178 genes)

pop00195 [list] [network] Photosynthesis (104 genes)

GO BP

GO CC

GO MF

Protein

YP_001109485.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, chlo 2, vacu 2, mito 1

(predict for YP_001109485.1)

Subcellular
localization
TargetP

other 8

(predict for YP_001109485.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for atpF	ppo-r.4 for atpF	gma-u.5 for atpF	mtr-u.5 for atpF	ath-u.5 for atpF	vvi-u.5 for atpF	ghi-r.1 for atpF	cit-r.1 for atpF	sly-u.5 for atpF	sot-r.1 for atpF	nta-r.1 for atpF	osa-u.5 for atpF	zma-u.5 for atpF	hvu-r.1 for atpF	sbi-r.1 for atpF	bdi-r.1 for atpF

Ortholog ID: 11818

Species

ppo

gma

mtr

ath

vvi

ghi

cit

sly

sot

nta

osa

zma

hvu

sbi

bdi

Symbol

atpF

Function^*

ATP synthase CF0 B subunit

ATPase subunit I

ATP synthase CF0 B subunit

ATPase subunit I

ATP synthase CF0 B subunit

ATP synthase CF0 subunit I

ATP synthase CF0 B subunit

ATPase subunit I

ATP synthase CF0 B subunit

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00195	Photosynthesis	9
ppo00190	Oxidative phosphorylation	5
ppo03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	12
gma00195	Photosynthesis	7
gma03020	RNA polymerase	2
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00195	Photosynthesis	8
mtr00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00195	Photosynthesis	9
ath00190	Oxidative phosphorylation	6
ath00970	Aminoacyl-tRNA biosynthesis	3
ath03010	Ribosome	2
ath01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	9
vvi00190	Oxidative phosphorylation	9
vvi00195	Photosynthesis	6
vvi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00195	Photosynthesis	9
ghi00190	Oxidative phosphorylation	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00195	Photosynthesis	10
cit00190	Oxidative phosphorylation	9
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	6
sly00195	Photosynthesis	6
sly03010	Ribosome	5
sly00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00195	Photosynthesis	7
sot00190	Oxidative phosphorylation	6
sot03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00195	Photosynthesis	10
nta00190	Oxidative phosphorylation	7
nta03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	8
osa00195	Photosynthesis	7
osa03010	Ribosome	6
osa03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	7
zma03020	RNA polymerase	6
zma00195	Photosynthesis	6
zma03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03020	RNA polymerase	10
hvu00195	Photosynthesis	9
hvu00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	8
sbi00190	Oxidative phosphorylation	6
sbi00195	Photosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	7
bdi03010	Ribosome	6
bdi00195	Photosynthesis	2
bdi00970	Aminoacyl-tRNA biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

4929639

3989297

5333195

844789

4025115

3989191

4271229

3950472

4099855

800473

3131391

845172

4525126

4549114

6439854

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to atpF (ppo-u.5 coexpression data)

Top 50 enrichment test to atpF (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	ghi	cit	sly	sot	nta	osa	zma	hvu	sbi	bdi	cre	bra	bna	tae
Paralog	2	1	1	1	1	1	1	1	1	1	1	1	1	1	1	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to atpF (ppo-u.5 coexpression data)

Top 50 enrichment test to atpF (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**