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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7464001   D-ribulose kinase 
 ppo-r.4   7464001   D-ribulose kinase 
 ppo-m.4   7464001   D-ribulose kinase 
 gma-u.5   100779892   D-ribulose kinase 
 mtr-u.5   11444339   D-ribulose kinase 
 ath-u.5   XK-1   xylulose kinase-1 
 bra-r.6   103842535   D-ribulose kinase 
 vvi-u.5   100248617   D-ribulose kinase 
 ghi-r.1   107913536   D-ribulose kinase 
 ghi-r.1   107920027   D-ribulose kinase 
 bna-r.1   106365988   D-ribulose kinase 
 bna-r.1   106415809   D-ribulose kinase 
 cit-r.1   102617017   D-ribulose kinase 
 sly-u.5   101268345   D-ribulose kinase 
 sot-r.1   102595504   xylulose kinase 
 nta-r.1   107811300   D-ribulose kinase-like 
 nta-r.1   107807835   D-ribulose kinase 
 osa-u.5   9267504   D-ribulose kinase 
 zma-u.5   100382087   xylulose kinase-1 
 tae-r.2   123180178   D-ribulose kinase 
 tae-r.2   123107460   D-ribulose kinase 
 tae-r.2   123188689   D-ribulose kinase 
 sbi-r.1   8057327   xylulose kinase 
 bdi-r.1   100832268   D-ribulose kinase 
 cre-r.1   CHLRE_02g098150v5   uncharacterized protein 

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Top 50 coexpressed genes to 7464001 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7464001 (ppo-u.5 coexpression data)

CoexMap"7464001"


ppoLOC7464001 | Entrez gene ID : 7464001    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae sbi bdi cre hvu
Paralog 3 1 1 1 1 1 2 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00040 [list] [network] Pentose and glucuronate interconversions (140 genes)
GO BP
GO:0005997 [list] [network] xylulose metabolic process  (2 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (1141 genes)  IEA  
GO MF
GO:0004856 [list] [network] D-xylulokinase activity  (2 genes)  IEA  
Protein XP_002313768.3 [sequence] [blastp]
XP_024464095.2 [sequence] [blastp]
XP_024464096.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  mito 1,  plas 1,  nucl_plas 1,  mito_plas 1  (predict for XP_002313768.3)
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_024464095.2)
chlo 6,  cyto 3,  nucl 1,  mito 1  (predict for XP_024464096.2)
Subcellular
localization
TargetP
chlo 8  (predict for XP_002313768.3)
chlo 8  (predict for XP_024464095.2)
scret 2  (predict for XP_024464096.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7464001
ppo-r.4
for
7464001
ppo-m.4
for
7464001
gma-u.5
for
100779892
mtr-u.5
for
11444339
ath-u.5
for
XK-1
bra-r.6
for
103842535
vvi-u.5
for
100248617
ghi-r.1
for
107913536
ghi-r.1
for
107920027
bna-r.1
for
106365988
bna-r.1
for
106415809
cit-r.1
for
102617017
sly-u.5
for
101268345
sot-r.1
for
102595504
nta-r.1
for
107811300
nta-r.1
for
107807835
osa-u.5
for
9267504
zma-u.5
for
100382087
tae-r.2
for
123180178
tae-r.2
for
123107460
tae-r.2
for
123188689
sbi-r.1
for
8057327
bdi-r.1
for
100832268
cre-r.1
for
CHLRE_02g098150v5


Ortholog ID: 10666
Species ppo gma mtr ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae sbi bdi cre
Symbol LOC7464001 LOC100779892 LOC11444339 XK-1 LOC103842535 LOC100248617 LOC107913536 LOC107920027 LOC106365988 LOC106415809 LOC102617017 LOC101268345 LOC102595504 LOC107811300 LOC107807835 LOC9267504 LOC100382087 LOC123180178 LOC123107460 LOC123188689 LOC8057327 LOC100832268 CHLRE_02g098150v5
Function* D-ribulose kinase D-ribulose kinase D-ribulose kinase xylulose kinase-1 D-ribulose kinase D-ribulose kinase D-ribulose kinase D-ribulose kinase D-ribulose kinase D-ribulose kinase D-ribulose kinase D-ribulose kinase xylulose kinase D-ribulose kinase-like D-ribulose kinase D-ribulose kinase xylulose kinase-1 D-ribulose kinase D-ribulose kinase D-ribulose kinase xylulose kinase D-ribulose kinase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00051 Fructose and mannose metabolism 2
gma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 7
mtr00710 Carbon fixation by Calvin cycle 5
mtr00010 Glycolysis / Gluconeogenesis 4
mtr00030 Pentose phosphate pathway 3
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00710 Carbon fixation by Calvin cycle 3
ath01200 Carbon metabolism 3
ath03018 RNA degradation 2
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 3
bra00195 Photosynthesis 3
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra01240 Biosynthesis of cofactors 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00790 Folate biosynthesis 2
vvi01240 Biosynthesis of cofactors 2
vvi00195 Photosynthesis 2
vvi04141 Protein processing in endoplasmic reticulum 2
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 2
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna04814 Motor proteins 2
bna00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00710 Carbon fixation by Calvin cycle 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00710 Carbon fixation by Calvin cycle 5
nta01200 Carbon metabolism 5
nta00030 Pentose phosphate pathway 4
nta00040 Pentose and glucuronate interconversions 4
nta01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00710 Carbon fixation by Calvin cycle 3
nta01200 Carbon metabolism 3
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 8
tae00710 Carbon fixation by Calvin cycle 8
tae01200 Carbon metabolism 8
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 9
tae00710 Carbon fixation by Calvin cycle 9
tae01200 Carbon metabolism 9
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi00710 Carbon fixation by Calvin cycle 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7464001 100779892 11444339 816675 103842535 100248617 107913536 107920027 106365988 106415809 102617017 101268345 102595504 107811300 107807835 9267504 100382087 123180178 123107460 123188689 8057327 100832268 5725387
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