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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7464698   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 ppo-r.4   7464698   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 ppo-m.4   7464698   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 gma-u.5   MCCA   3-methylcrotonyl-CoA carboxylase 1 
 gma-u.5   100804850   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 mtr-u.5   11431272   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 ath-u.5   MCCA   methylcrotonyl-CoA carboxylase alpha chain 
 bra-r.6   103843706   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 vvi-u.5   100853875   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 ghi-r.1   107914801   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 ghi-r.1   107951384   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 bna-r.1   106369280   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 bna-r.1   106405765   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 cit-r.1   102627082   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 sly-u.5   543993   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 sot-r.1   102596438   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 nta-r.1   107796067   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 nta-r.1   107782261   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 osa-u.5   4352741   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like 
 zma-u.5   100280665   methylcrotonoyl-CoA carboxylase subunit alpha 
 tae-r.2   123110466   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 tae-r.2   123119456   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 tae-r.2   123102270   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 hvu-r.1   123395941   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 sbi-r.1   8076667   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 bdi-r.1   100828042   methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 
 cre-r.1   CHLRE_06g278098v5   uncharacterized protein 

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Top 50 coexpressed genes to 7464698 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7464698 (ppo-u.5 coexpression data)

CoexMap"7464698"


ppoLOC7464698 | Entrez gene ID : 7464698    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 1 1 1 2 2 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00280 [list] [network] Valine, leucine and isoleucine degradation (65 genes)
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (675 genes)  IEA  
GO MF
GO:0004485 [list] [network] methylcrotonoyl-CoA carboxylase activity  (2 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2135 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_024457671.1 [sequence] [blastp]
XP_024457672.1 [sequence] [blastp]
XP_024457673.1 [sequence] [blastp]
XP_024457674.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 2,  plas 1,  golg 1,  cyto_nucl 1,  golg_plas 1  (predict for XP_024457671.1)
mito 4,  chlo 3,  mito_plas 3  (predict for XP_024457672.1)
mito 6,  chlo 2,  plas 1,  golg 1,  cyto_nucl 1,  golg_plas 1  (predict for XP_024457673.1)
cyto 6,  E.R. 2,  plas 1,  vacu 1  (predict for XP_024457674.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_024457671.1)
mito 5  (predict for XP_024457672.1)
mito 5  (predict for XP_024457673.1)
other 8  (predict for XP_024457674.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7464698
ppo-r.4
for
7464698
ppo-m.4
for
7464698
gma-u.5
for
MCCA
gma-u.5
for
100804850
mtr-u.5
for
11431272
ath-u.5
for
MCCA
bra-r.6
for
103843706
vvi-u.5
for
100853875
ghi-r.1
for
107914801
ghi-r.1
for
107951384
bna-r.1
for
106369280
bna-r.1
for
106405765
cit-r.1
for
102627082
sly-u.5
for
543993
sot-r.1
for
102596438
nta-r.1
for
107796067
nta-r.1
for
107782261
osa-u.5
for
4352741
zma-u.5
for
100280665
tae-r.2
for
123110466
tae-r.2
for
123119456
tae-r.2
for
123102270
hvu-r.1
for
123395941
sbi-r.1
for
8076667
bdi-r.1
for
100828042
cre-r.1
for
CHLRE_06g278098v5


Ortholog ID: 10462
Species ppo gma gma mtr ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC7464698 MCCA LOC100804850 LOC11431272 MCCA LOC103843706 LOC100853875 LOC107914801 LOC107951384 LOC106369280 LOC106405765 LOC102627082 LOC543993 LOC102596438 LOC107796067 LOC107782261 LOC4352741 LOC100280665 LOC123110466 LOC123119456 LOC123102270 LOC123395941 LOC8076667 LOC100828042 CHLRE_06g278098v5
Function* methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 3-methylcrotonyl-CoA carboxylase 1 methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonyl-CoA carboxylase alpha chain methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like methylcrotonoyl-CoA carboxylase subunit alpha methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00280 Valine, leucine and isoleucine degradation 4
ppo00520 Amino sugar and nucleotide sugar metabolism 2
ppo01250 Biosynthesis of nucleotide sugars 2
ppo00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 11
gma00640 Propanoate metabolism 5
gma04146 Peroxisome 3
gma00785 Lipoic acid metabolism 3
gma01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 10
gma00640 Propanoate metabolism 4
gma00071 Fatty acid degradation 3
gma01212 Fatty acid metabolism 3
gma04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 6
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr00310 Lysine degradation 2
mtr00270 Cysteine and methionine metabolism 2
mtr01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 7
ath01210 2-Oxocarboxylic acid metabolism 4
ath00640 Propanoate metabolism 3
ath01200 Carbon metabolism 3
ath00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 7
bra00640 Propanoate metabolism 4
bra01210 2-Oxocarboxylic acid metabolism 4
bra01200 Carbon metabolism 4
bra00410 beta-Alanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00280 Valine, leucine and isoleucine degradation 4
vvi00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 5
ghi00330 Arginine and proline metabolism 3
ghi00640 Propanoate metabolism 3
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 5
ghi00330 Arginine and proline metabolism 3
ghi00640 Propanoate metabolism 3
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00280 Valine, leucine and isoleucine degradation 14
bna00640 Propanoate metabolism 8
bna00785 Lipoic acid metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna00410 beta-Alanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00280 Valine, leucine and isoleucine degradation 12
bna00640 Propanoate metabolism 6
bna00785 Lipoic acid metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00280 Valine, leucine and isoleucine degradation 5
sly00330 Arginine and proline metabolism 3
sly00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00280 Valine, leucine and isoleucine degradation 4
sot00310 Lysine degradation 3
sot00260 Glycine, serine and threonine metabolism 2
sot00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 9
nta00270 Cysteine and methionine metabolism 7
nta01210 2-Oxocarboxylic acid metabolism 7
nta00250 Alanine, aspartate and glutamate metabolism 6
nta01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 6
nta00520 Amino sugar and nucleotide sugar metabolism 4
nta01250 Biosynthesis of nucleotide sugars 4
nta00250 Alanine, aspartate and glutamate metabolism 4
nta00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 10
osa00640 Propanoate metabolism 5
osa00410 beta-Alanine metabolism 3
osa00785 Lipoic acid metabolism 3
osa01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 7
zma00640 Propanoate metabolism 3
zma00785 Lipoic acid metabolism 3
zma01210 2-Oxocarboxylic acid metabolism 3
zma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 14
tae04146 Peroxisome 4
tae01210 2-Oxocarboxylic acid metabolism 4
tae00650 Butanoate metabolism 3
tae00640 Propanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 11
tae01210 2-Oxocarboxylic acid metabolism 5
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00260 Glycine, serine and threonine metabolism 3
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 12
tae00910 Nitrogen metabolism 3
tae00640 Propanoate metabolism 2
tae00785 Lipoic acid metabolism 2
tae01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 8
hvu00640 Propanoate metabolism 5
hvu00410 beta-Alanine metabolism 3
hvu01200 Carbon metabolism 3
hvu00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00280 Valine, leucine and isoleucine degradation 6
sbi01210 2-Oxocarboxylic acid metabolism 3
sbi00640 Propanoate metabolism 2
sbi00785 Lipoic acid metabolism 2
sbi00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 8
bdi00640 Propanoate metabolism 4
bdi00785 Lipoic acid metabolism 3
bdi01210 2-Oxocarboxylic acid metabolism 3
bdi00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00280 Valine, leucine and isoleucine degradation 3
cre00350 Tyrosine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7464698 548094 100804850 11431272 838362 103843706 100853875 107914801 107951384 106369280 106405765 102627082 543993 102596438 107796067 107782261 4352741 100280665 123110466 123119456 123102270 123395941 8076667 100828042 5723671
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