ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7464899	vacuolar protein 8
ppo-r.4	7464899	vacuolar protein 8
ppo-u.5	7494038	protein CELLULOSE SYNTHASE INTERACTIVE 3
gma-u.5	100809488	protein spotted leaf 11
gma-u.5	100798922	uncharacterized LOC100798922
gma-u.5	100789140	protein ARABIDILLO 2
mtr-u.5	25500952	protein CELLULOSE SYNTHASE INTERACTIVE 1
mtr-u.5	11435375	protein CELLULOSE SYNTHASE INTERACTIVE 1
ath-u.5	AT2G45720	ARM repeat superfamily protein
ath-u.5	AT1G01830	ARM repeat superfamily protein
bra-r.6	103844682	protein CELLULOSE SYNTHASE INTERACTIVE 3
bra-r.6	103858187	protein CELLULOSE SYNTHASE INTERACTIVE 1
vvi-u.5	100250612	vacuolar protein 8
ghi-r.1	107957269	protein spotted leaf 11
ghi-r.1	107911947	protein spotted leaf 11
ghi-r.1	107900907	protein CELLULOSE SYNTHASE INTERACTIVE 1
bna-r.1	106438258	uncharacterized LOC106438258
bna-r.1	106370836	protein CELLULOSE SYNTHASE INTERACTIVE 3
bna-r.1	106358388	armadillo repeat-containing protein 3
cit-r.1	127901361	vacuolar protein 8-like
cit-r.1	102624738	vacuolar protein 8
sly-u.5	101261067	U-box domain-containing protein 12
sot-r.1	102592384	uncharacterized LOC102592384
nta-r.1	107761601	uncharacterized LOC107761601
nta-r.1	107815217	uncharacterized LOC107815217
osa-u.5	9268059	protein ARABIDILLO 2
osa-u.5	4331407	protein ARABIDILLO 2
zma-u.5	103630849	vacuolar protein 8
zma-u.5	100272841	putative ARM repeat-containing protein
zma-u.5	100279787	putative ARM repeat-containing protein containing family protein
tae-r.2	123049582	vacuolar protein 8
tae-r.2	123106000	vacuolar protein 8
tae-r.2	123093826	vacuolar protein 8
hvu-r.1	123449916	vacuolar protein 8-like
hvu-r.1	123435126	U-box domain-containing protein 15-like
sbi-r.1	8059478	U-box domain-containing protein 4
sbi-r.1	8063182	U-box domain-containing protein 15
bdi-r.1	100846680	uncharacterized LOC100846680
bdi-r.1	100838712	U-box domain-containing protein 15

Top 50 coexpressed genes to 7464899 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7464899 (ppo-u.5 coexpression data)

CoexMap"7464899"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(4916 genes)

IEA

Protein

XP_024441406.2 [sequence] [blastp]
XP_024441407.2 [sequence] [blastp]
XP_024441408.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, chlo 3	(predict for XP_024441406.2)
cyto 6, chlo 3	(predict for XP_024441407.2)
cyto 6, chlo 3	(predict for XP_024441408.2)

Subcellular
localization
TargetP

other 8	(predict for XP_024441406.2)
other 8	(predict for XP_024441407.2)
other 8	(predict for XP_024441408.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7464899	ppo-r.4 for 7464899	ppo-u.5 for 7494038	gma-u.5 for 100809488	gma-u.5 for 100798922	gma-u.5 for 100789140	mtr-u.5 for 25500952	mtr-u.5 for 11435375	ath-u.5 for AT2G45720	ath-u.5 for AT1G01830	bra-r.6 for 103844682	bra-r.6 for 103858187	vvi-u.5 for 100250612	ghi-r.1 for 107957269	ghi-r.1 for 107911947	ghi-r.1 for 107900907	bna-r.1 for 106438258	bna-r.1 for 106370836	bna-r.1 for 106358388	cit-r.1 for 127901361	cit-r.1 for 102624738	sly-u.5 for 101261067	sot-r.1 for 102592384	nta-r.1 for 107761601	nta-r.1 for 107815217	osa-u.5 for 9268059	osa-u.5 for 4331407	zma-u.5 for 103630849	zma-u.5 for 100272841	zma-u.5 for 100279787	tae-r.2 for 123049582	tae-r.2 for 123106000	tae-r.2 for 123093826	hvu-r.1 for 123449916	hvu-r.1 for 123435126	sbi-r.1 for 8059478	sbi-r.1 for 8063182	bdi-r.1 for 100846680	bdi-r.1 for 100838712

Ortholog

Ortholog ID: 4214

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

vacuolar protein 8

protein CELLULOSE SYNTHASE INTERACTIVE 3

protein spotted leaf 11

protein ARABIDILLO 2

vacuolar protein 8

protein CELLULOSE SYNTHASE INTERACTIVE 1

ARM repeat superfamily protein

protein CELLULOSE SYNTHASE INTERACTIVE 3

protein CELLULOSE SYNTHASE INTERACTIVE 1

vacuolar protein 8

protein spotted leaf 11

protein CELLULOSE SYNTHASE INTERACTIVE 1

uncharacterized LOC106438258

protein CELLULOSE SYNTHASE INTERACTIVE 3

armadillo repeat-containing protein 3

vacuolar protein 8-like

vacuolar protein 8

U-box domain-containing protein 12

uncharacterized LOC102592384

uncharacterized LOC107761601

uncharacterized LOC107815217

protein ARABIDILLO 2

vacuolar protein 8

putative ARM repeat-containing protein

putative ARM repeat-containing protein containing family protein

vacuolar protein 8

vacuolar protein 8-like

U-box domain-containing protein 15-like

U-box domain-containing protein 4

U-box domain-containing protein 15

uncharacterized LOC100846680

U-box domain-containing protein 15

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00944	Flavone and flavonol biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	3
ghi03410	Base excision repair	3
ghi03420	Nucleotide excision repair	3
ghi03430	Mismatch repair	3
ghi03440	Homologous recombination	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	3
ghi03410	Base excision repair	3
ghi03420	Nucleotide excision repair	3
ghi03430	Mismatch repair	3
ghi03440	Homologous recombination	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00270	Cysteine and methionine metabolism	2
ghi04148	Efferocytosis	2
ghi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00440	Phosphonate and phosphinate metabolism	2
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00440	Phosphonate and phosphinate metabolism	2
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
zma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	4
zma03008	Ribosome biogenesis in eukaryotes	3
zma03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00591	Linoleic acid metabolism	3
tae00592	alpha-Linolenic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

7464899

7494038

100809488

100789140

100781453

25500952

11435375

819180

839264

103844682

103858187

100250612

107957269

107911947

107923673

106438258

106370836

106358388

127901361

102624738

101261067

102592384

107761601

107815217

9268059

4331407

103630849

100272841

100279787

123049582

123093826

123181381

123449916

123435126

8059478

8063182

100846680

100838712

The preparation time of this page was 0.4 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	3	2	2	2	1	3	3	2	1	1	2	2	3	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7464899 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7464899 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**