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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7465366   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 ppo-r.4   7465366   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 gma-u.5   100790985   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like 
 gma-u.5   100786962   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 mtr-u.5   11437638   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 ath-u.5   PTAC14   plastid transcriptionally active 14 
 bra-r.6   103834151   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 vvi-u.5   100264713   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 ghi-r.1   107958695   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 ghi-r.1   107907315   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 ghi-r.1   107944382   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 bna-r.1   111204235   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 bna-r.1   125583872   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 bna-r.1   106389871   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 cit-r.1   102610649   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 sly-u.5   101252349   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 sot-r.1   102593548   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 nta-r.1   107814338   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like 
 nta-r.1   107826747   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like 
 osa-u.5   4339764   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 zma-u.5   100279779   plastid transcriptionally active14 
 tae-r.2   123149018   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 tae-r.2   123070075   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 hvu-r.1   123452251   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 hvu-r.1   123452269   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like 
 sbi-r.1   8065299   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 bdi-r.1   100845588   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 cre-r.1   CHLRE_16g649700v5   uncharacterized protein 
 cre-r.1   CHLRE_03g201332v5   uncharacterized protein 

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Top 50 coexpressed genes to 7465366 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7465366 (ppo-u.5 coexpression data)

CoexMap"7465366"


ppoLOC7465366 | Entrez gene ID : 7465366    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 1 1 1 1 3 3 1 1 1 2 1 1 2 2 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042793 [list] [network] plastid transcription  (5 genes)  IEA  
GO:0018026 [list] [network] peptidyl-lysine monomethylation  (12 genes)  IEA  
GO:0010027 [list] [network] thylakoid membrane organization  (18 genes)  IEA  
GO:0009658 [list] [network] chloroplast organization  (99 genes)  IEA  
GO CC
GO:0000427 [list] [network] plastid-encoded plastid RNA polymerase complex  (4 genes)  IEA  
GO:0009534 [list] [network] chloroplast thylakoid  (147 genes)  IEA  
GO MF
GO:0016279 [list] [network] protein-lysine N-methyltransferase activity  (26 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024452419.2 [sequence] [blastp]
XP_052307772.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  mito 2,  cysk_nucl 2,  mito_plas 1  (predict for XP_024452419.2)
nucl 4,  mito 2,  mito_plas 1,  cyto 1,  chlo 1,  golg 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_052307772.1)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for XP_024452419.2)
chlo 7,  other 3  (predict for XP_052307772.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7465366
ppo-r.4
for
7465366
gma-u.5
for
100790985
gma-u.5
for
100786962
mtr-u.5
for
11437638
ath-u.5
for
PTAC14
bra-r.6
for
103834151
vvi-u.5
for
100264713
ghi-r.1
for
107958695
ghi-r.1
for
107907315
ghi-r.1
for
107944382
bna-r.1
for
111204235
bna-r.1
for
125583872
bna-r.1
for
106389871
cit-r.1
for
102610649
sly-u.5
for
101252349
sot-r.1
for
102593548
nta-r.1
for
107814338
nta-r.1
for
107826747
osa-u.5
for
4339764
zma-u.5
for
100279779
tae-r.2
for
123149018
tae-r.2
for
123070075
hvu-r.1
for
123452251
hvu-r.1
for
123452269
sbi-r.1
for
8065299
bdi-r.1
for
100845588
cre-r.1
for
CHLRE_16g649700v5
cre-r.1
for
CHLRE_03g201332v5


Ortholog ID: 7284
Species ppo gma gma mtr ath bra vvi ghi ghi ghi bna bna bna cit sly sot nta nta osa zma tae tae hvu hvu sbi bdi cre cre
Symbol LOC7465366 LOC100790985 LOC100786962 LOC11437638 PTAC14 LOC103834151 LOC100264713 LOC107958695 LOC107907315 LOC107944382 LOC111204235 LOC125583872 LOC106389871 LOC102610649 LOC101252349 LOC102593548 LOC107814338 LOC107826747 LOC4339764 LOC100279779 LOC123070075 LOC123183318 LOC123452251 LOC123452269 LOC8065299 LOC100845588 CHLRE_16g649700v5 CHLRE_03g201332v5
Function* protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 plastid transcriptionally active 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 plastid transcriptionally active14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 2
zma03010 Ribosome 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00710 Carbon fixation by Calvin cycle 5
cre01200 Carbon metabolism 5
cre00500 Starch and sucrose metabolism 4
cre00030 Pentose phosphate pathway 3
cre00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7465366 100790985 100786962 11437638 827759 103834151 100264713 107958695 107907315 107944382 111204235 125583872 106389871 102610649 101252349 102593548 107814338 107826747 4339764 100279779 123070075 123183318 123452251 123452269 8065299 100845588 5723812 66052996
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