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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7468129   YTH domain-containing protein ECT4 
 ppo-r.4   7468129   YTH domain-containing protein ECT4 
 ppo-m.4   7468129   YTH domain-containing protein ECT4 
 ppo-u.5   7498232   YTH domain-containing protein ECT4 
 gma-u.5   100818167   YTH domain-containing protein ECT4 
 gma-u.5   100777489   YTH domain-containing protein ECT4 
 gma-u.5   100784464   YTH domain-containing protein ECT4 
 mtr-u.5   11420003   YTH domain-containing protein ECT4 
 mtr-u.5   11411723   YTH domain-containing protein ECT4 
 ath-u.5   ECT6   evolutionarily conserved C-terminal region 6 
 ath-u.5   ECT7   evolutionarily conserved C-terminal region 7 
 bra-r.6   103871495   YTH domain-containing protein ECT4 
 vvi-u.5   100854837   YTH domain-containing protein ECT4 
 ghi-r.1   107936122   YTH domain-containing protein ECT4 
 ghi-r.1   121203689   YTH domain-containing protein ECT3 
 ghi-r.1   107951606   YTH domain-containing protein ECT2 
 bna-r.1   106406172   YTH domain-containing protein ECT4 
 bna-r.1   106346402   YTH domain-containing protein ECT4-like 
 cit-r.1   102624076   YTH domain-containing protein ECT4-like 
 sly-u.5   101245931   YTH domain-containing protein ECT4 
 sot-r.1   102589124   uncharacterized LOC102589124 
 nta-r.1   107822945   uncharacterized LOC107822945 
 nta-r.1   107813705   uncharacterized LOC107813705 
 nta-r.1   107770850   YTH domain-containing protein ECT4 
 osa-u.5   4332656   YTH domain-containing protein ECT4 
 tae-r.2   123097639   YTH domain-containing protein ECT4 
 tae-r.2   123092302   YTH domain-containing protein ECT4 
 tae-r.2   123085703   YTH domain-containing protein ECT4 
 hvu-r.1   123448786   YTH domain-containing protein ECT4-like 
 bdi-r.1   100822058   uncharacterized LOC100822058 

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Top 50 coexpressed genes to 7468129 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7468129 (ppo-u.5 coexpression data)

CoexMap"7468129"


ppoLOC7468129 | Entrez gene ID : 7468129    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa tae hvu bdi cre sbi zma
Paralog 4 3 2 2 1 1 3 2 1 1 1 3 1 3 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0061157 [list] [network] mRNA destabilization  (41 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (348 genes)  IEA  
Protein XP_002316068.2 [sequence] [blastp]
XP_024466619.2 [sequence] [blastp]
XP_024466620.1 [sequence] [blastp]
XP_024466621.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002316068.2)
nucl 9,  pero 1,  cysk 1  (predict for XP_024466619.2)
nucl 9,  vacu 1,  cysk 1  (predict for XP_024466620.1)
nucl 9,  vacu 1,  cysk 1  (predict for XP_024466621.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002316068.2)
other 6  (predict for XP_024466619.2)
other 7,  scret 3  (predict for XP_024466620.1)
other 7,  scret 3  (predict for XP_024466621.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7468129
ppo-r.4
for
7468129
ppo-m.4
for
7468129
ppo-u.5
for
7498232
gma-u.5
for
100818167
gma-u.5
for
100777489
gma-u.5
for
100784464
mtr-u.5
for
11420003
mtr-u.5
for
11411723
ath-u.5
for
ECT6
ath-u.5
for
ECT7
bra-r.6
for
103871495
vvi-u.5
for
100854837
ghi-r.1
for
107936122
ghi-r.1
for
121203689
ghi-r.1
for
107951606
bna-r.1
for
106406172
bna-r.1
for
106346402
cit-r.1
for
102624076
sly-u.5
for
101245931
sot-r.1
for
102589124
nta-r.1
for
107822945
nta-r.1
for
107813705
nta-r.1
for
107770850
osa-u.5
for
4332656
tae-r.2
for
123097639
tae-r.2
for
123092302
tae-r.2
for
123085703
hvu-r.1
for
123448786
bdi-r.1
for
100822058


Ortholog ID: 7572
Species ppo ppo gma gma gma mtr mtr ath ath bra vvi ghi ghi ghi bna bna cit sly sot nta nta nta osa tae tae tae hvu bdi
Symbol LOC7468129 LOC7498232 LOC100818167 LOC100777489 LOC100784464 LOC11420003 LOC11411723 ECT6 ECT7 LOC103871495 LOC100854837 LOC107936122 LOC121203689 LOC107910541 LOC106406172 LOC106346402 LOC102624076 LOC101245931 LOC102589124 LOC107822945 LOC107813705 LOC107808296 LOC4332656 LOC123097639 LOC123092302 LOC123085703 LOC123448786 LOC100822058
Function* YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 evolutionarily conserved C-terminal region 6 evolutionarily conserved C-terminal region 7 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT3 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4-like YTH domain-containing protein ECT4-like YTH domain-containing protein ECT4 uncharacterized LOC102589124 uncharacterized LOC107822945 uncharacterized LOC107813705 YTH domain-containing protein ECT4-like YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4-like uncharacterized LOC100822058
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath03015 mRNA surveillance pathway 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 4
vvi04144 Endocytosis 2
vvi03018 RNA degradation 2
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot04382 Cornified envelope formation 2
sot03008 Ribosome biogenesis in eukaryotes 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 3
nta04120 Ubiquitin mediated proteolysis 3
nta04141 Protein processing in endoplasmic reticulum 3
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03083 Polycomb repressive complex 2
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04145 Phagosome 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04145 Phagosome 3
tae04120 Ubiquitin mediated proteolysis 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04145 Phagosome 3
tae04120 Ubiquitin mediated proteolysis 3
tae03018 RNA degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7468129 7498232 100818167 100777489 100784464 11420003 11411723 820996 841229 103871495 100854837 107936122 121203689 107910541 106406172 106346402 102624076 101245931 102589124 107822945 107813705 107808296 4332656 123097639 123092302 123085703 123448786 100822058
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