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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7469366   acyl-coenzyme A thioesterase 2, chloroplastic 
 ppo-r.4   7469366   acyl-coenzyme A thioesterase 2, chloroplastic 
 ppo-m.4   7469366   acyl-coenzyme A thioesterase 2, chloroplastic 
 ppo-u.5   7472537   acyl-coenzyme A thioesterase 2, chloroplastic 
 ppo-u.5   7488616   acyl-coenzyme A thioesterase 2, chloroplastic 
 gma-u.5   100818340   acyl-coenzyme A thioesterase 9, mitochondrial 
 gma-u.5   100815138   acyl-coenzyme A thioesterase 9, mitochondrial 
 gma-u.5   100805292   acyl-coenzyme A thioesterase-like protein 
 mtr-u.5   11442552   acyl-coenzyme A thioesterase 9, mitochondrial 
 mtr-u.5   11446988   acyl-coenzyme A thioesterase 9, mitochondrial 
 ath-u.5   AT2G30720   Thioesterase/thiol ester dehydrase-isomerase superfamily protein 
 ath-u.5   AT5G48370   Thioesterase/thiol ester dehydrase-isomerase superfamily protein 
 bra-r.6   103837248   acyl-coenzyme A thioesterase 9, mitochondrial 
 bra-r.6   103865068   acyl-coenzyme A thioesterase 9, mitochondrial 
 vvi-u.5   100257866   acyl-coenzyme A thioesterase 2, chloroplastic 
 vvi-u.5   100267947   acyl-coenzyme A thioesterase 2, chloroplastic 
 vvi-u.5   100256349   acyl-coenzyme A thioesterase 2, chloroplastic 
 ghi-r.1   107924087   acyl-coenzyme A thioesterase 9, mitochondrial 
 ghi-r.1   107914581   acyl-coenzyme A thioesterase 9, mitochondrial 
 ghi-r.1   107912502   acyl-coenzyme A thioesterase 9, mitochondrial 
 bna-r.1   106348382   acyl-coenzyme A thioesterase 4, mitochondrial 
 bna-r.1   106365818   acyl-coenzyme A thioesterase 2, chloroplastic-like 
 bna-r.1   106426390   acyl-coenzyme A thioesterase 4, mitochondrial 
 cit-r.1   102615579   acyl-coenzyme A thioesterase 2, chloroplastic-like 
 cit-r.1   102614496   acyl-coenzyme A thioesterase 2, chloroplastic 
 sly-u.5   101245829   thioesterase superfamily protein 
 sly-u.5   101268358   acyl-coenzyme A thioesterase 2, chloroplastic 
 sly-u.5   101255027   acyl-coenzyme A thioesterase 2, chloroplastic 
 sot-r.1   102600344   acyl-coenzyme A thioesterase 9, mitochondrial-like 
 sot-r.1   102589127   acyl-coenzyme A thioesterase 9, mitochondrial 
 sot-r.1   102593544   acyl-coenzyme A thioesterase 9, mitochondrial-like 
 nta-r.1   107829339   acyl-coenzyme A thioesterase 2, chloroplastic-like 
 nta-r.1   107817953   acyl-coenzyme A thioesterase 2, chloroplastic-like 
 nta-r.1   107803412   acyl-coenzyme A thioesterase 2, chloroplastic-like 
 osa-u.5   4347589   acyl-coenzyme A thioesterase 9, mitochondrial 
 zma-u.5   103647590   acyl-coenzyme A thioesterase 9, mitochondrial 
 tae-r.2   123114915   acyl-coenzyme A thioesterase 2, chloroplastic 
 tae-r.2   123104433   acyl-coenzyme A thioesterase 2, chloroplastic 
 tae-r.2   123122208   acyl-coenzyme A thioesterase 2, chloroplastic 
 hvu-r.1   123399959   acyl-coenzyme A thioesterase 2, chloroplastic 
 sbi-r.1   8059010   acyl-coenzyme A thioesterase 9, mitochondrial 
 bdi-r.1   100826378   acyl-coenzyme A thioesterase 9, mitochondrial 
 cre-r.1   CHLRE_01g037350v5   uncharacterized protein 

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Top 50 coexpressed genes to 7469366 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7469366 (ppo-u.5 coexpression data)

CoexMap"7469366"


ppoLOC7469366 | Entrez gene ID : 7469366    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 2 2 2 3 3 3 2 3 3 3 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006637 [list] [network] acyl-CoA metabolic process  (45 genes)  IEA  
GO CC
GO MF
GO:0047617 [list] [network] fatty acyl-CoA hydrolase activity  (21 genes)  IEA  
Protein XP_002321229.4 [sequence] [blastp]
XP_052302764.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  cyto 3,  cysk 2,  cyto_nucl 2  (predict for XP_002321229.4)
chlo 3,  cyto 3,  cysk 2,  nucl 1,  plas 1,  nucl_plas 1,  E.R._vacu 1  (predict for XP_052302764.1)
Subcellular
localization
TargetP
chlo 7,  other 5  (predict for XP_002321229.4)
chlo 7,  other 5  (predict for XP_052302764.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7469366
ppo-r.4
for
7469366
ppo-m.4
for
7469366
ppo-u.5
for
7472537
ppo-u.5
for
7488616
gma-u.5
for
100818340
gma-u.5
for
100815138
gma-u.5
for
100805292
mtr-u.5
for
11442552
mtr-u.5
for
11446988
ath-u.5
for
AT2G30720
ath-u.5
for
AT5G48370
bra-r.6
for
103837248
bra-r.6
for
103865068
vvi-u.5
for
100257866
vvi-u.5
for
100267947
vvi-u.5
for
100256349
ghi-r.1
for
107924087
ghi-r.1
for
107914581
ghi-r.1
for
107912502
bna-r.1
for
106348382
bna-r.1
for
106365818
bna-r.1
for
106426390
cit-r.1
for
102615579
cit-r.1
for
102614496
sly-u.5
for
101245829
sly-u.5
for
101268358
sly-u.5
for
101255027
sot-r.1
for
102600344
sot-r.1
for
102589127
sot-r.1
for
102593544
nta-r.1
for
107829339
nta-r.1
for
107817953
nta-r.1
for
107803412
osa-u.5
for
4347589
zma-u.5
for
103647590
tae-r.2
for
123114915
tae-r.2
for
123104433
tae-r.2
for
123122208
hvu-r.1
for
123399959
sbi-r.1
for
8059010
bdi-r.1
for
100826378
cre-r.1
for
CHLRE_01g037350v5


Ortholog ID: 3662
Species ppo ppo ppo gma gma gma mtr mtr ath ath bra bra vvi vvi vvi ghi ghi ghi bna bna bna cit cit sly sly sly sot sot sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC7469366 LOC7472537 LOC7488616 LOC100818340 LOC100815138 LOC100802368 LOC11442552 LOC11446988 AT2G30720 AT5G48370 LOC103837248 LOC103865068 LOC100257866 LOC100267947 LOC100256349 LOC107914581 LOC107912502 LOC107955006 LOC106348382 LOC106365818 LOC106426390 LOC102615579 LOC102614496 LOC101245829 LOC101268358 LOC101255027 LOC102600344 LOC102589127 LOC102593544 LOC107803412 LOC107793172 LOC107782721 LOC4347589 LOC103647590 LOC123114915 LOC123104433 LOC123122208 LOC123399959 LOC8059010 LOC100826378 CHLRE_01g037350v5
Function* acyl-coenzyme A thioesterase 2, chloroplastic acyl-coenzyme A thioesterase 2, chloroplastic acyl-coenzyme A thioesterase 2, chloroplastic acyl-coenzyme A thioesterase 9, mitochondrial acyl-coenzyme A thioesterase 9, mitochondrial acyl-coenzyme A thioesterase 9, mitochondrial acyl-coenzyme A thioesterase 9, mitochondrial acyl-coenzyme A thioesterase 9, mitochondrial Thioesterase/thiol ester dehydrase-isomerase superfamily protein Thioesterase/thiol ester dehydrase-isomerase superfamily protein acyl-coenzyme A thioesterase 9, mitochondrial acyl-coenzyme A thioesterase 9, mitochondrial acyl-coenzyme A thioesterase 2, chloroplastic acyl-coenzyme A thioesterase 2, chloroplastic acyl-coenzyme A thioesterase 2, chloroplastic acyl-coenzyme A thioesterase 9, mitochondrial acyl-coenzyme A thioesterase 9, mitochondrial acyl-coenzyme A thioesterase 9, mitochondrial acyl-coenzyme A thioesterase 4, mitochondrial acyl-coenzyme A thioesterase 2, chloroplastic-like acyl-coenzyme A thioesterase 4, mitochondrial acyl-coenzyme A thioesterase 2, chloroplastic-like acyl-coenzyme A thioesterase 2, chloroplastic thioesterase superfamily protein acyl-coenzyme A thioesterase 2, chloroplastic acyl-coenzyme A thioesterase 2, chloroplastic acyl-coenzyme A thioesterase 9, mitochondrial-like acyl-coenzyme A thioesterase 9, mitochondrial acyl-coenzyme A thioesterase 9, mitochondrial-like acyl-coenzyme A thioesterase 2, chloroplastic-like acyl-coenzyme A thioesterase 2, chloroplastic acyl-coenzyme A thioesterase 2, chloroplastic acyl-coenzyme A thioesterase 9, mitochondrial acyl-coenzyme A thioesterase 9, mitochondrial acyl-coenzyme A thioesterase 2, chloroplastic acyl-coenzyme A thioesterase 2, chloroplastic acyl-coenzyme A thioesterase 2, chloroplastic acyl-coenzyme A thioesterase 2, chloroplastic acyl-coenzyme A thioesterase 9, mitochondrial acyl-coenzyme A thioesterase 9, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 3
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 6
ppo00510 N-Glycan biosynthesis 5
ppo00513 Various types of N-glycan biosynthesis 5
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 5
ppo00410 beta-Alanine metabolism 3
ppo00480 Glutathione metabolism 3
ppo00280 Valine, leucine and isoleucine degradation 2
ppo00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma04626 Plant-pathogen interaction 3
gma04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00650 Butanoate metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 2
gma04981 Folate transport and metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00650 Butanoate metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
ath04626 Plant-pathogen interaction 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00071 Fatty acid degradation 2
ath00592 alpha-Linolenic acid metabolism 2
ath01212 Fatty acid metabolism 2
ath04144 Endocytosis 2
ath00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00020 Citrate cycle (TCA cycle) 2
bra00270 Cysteine and methionine metabolism 2
bra00620 Pyruvate metabolism 2
bra01200 Carbon metabolism 2
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 8
ghi00061 Fatty acid biosynthesis 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
ghi01212 Fatty acid metabolism 2
ghi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
ghi00020 Citrate cycle (TCA cycle) 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 4
bna04146 Peroxisome 2
bna02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
bna03013 Nucleocytoplasmic transport 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly03008 Ribosome biogenesis in eukaryotes 2
sly04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot04144 Endocytosis 3
sot03250 Viral life cycle - HIV-1 2
sot03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00670 One carbon pool by folate 2
nta04981 Folate transport and metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
nta04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 9
osa04141 Protein processing in endoplasmic reticulum 3
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 3
zma01250 Biosynthesis of nucleotide sugars 3
zma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00785 Lipoic acid metabolism 4
tae01210 2-Oxocarboxylic acid metabolism 4
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00650 Butanoate metabolism 3
tae00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00785 Lipoic acid metabolism 4
tae01210 2-Oxocarboxylic acid metabolism 4
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00650 Butanoate metabolism 3
tae00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01210 2-Oxocarboxylic acid metabolism 8
tae00280 Valine, leucine and isoleucine degradation 6
tae00785 Lipoic acid metabolism 6
tae00640 Propanoate metabolism 4
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 3
sbi00260 Glycine, serine and threonine metabolism 2
sbi00630 Glyoxylate and dicarboxylate metabolism 2
sbi01200 Carbon metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00071 Fatty acid degradation 4
bdi01212 Fatty acid metabolism 4
bdi00592 alpha-Linolenic acid metabolism 3
bdi01200 Carbon metabolism 2
bdi04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7469366 7472537 7488616 100818340 100815138 100802368 11442552 11446988 817623 834890 103837248 103865068 100257866 100267947 100256349 107914581 107912502 107955006 106348382 106365818 106426390 102615579 102614496 101245829 101268358 101255027 102600344 102589127 102593544 107803412 107793172 107782721 4347589 103647590 123114915 123104433 123122208 123399959 8059010 100826378 5715495
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