ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7469892	uncharacterized LOC7469892
ppo-r.4	7469892	uncharacterized LOC7469892
ppo-m.4	7469892	uncharacterized LOC7469892
ppo-u.5	7478601	uncharacterized LOC7478601
gma-u.5	100816705	beta-glucosidase BoGH3B
gma-u.5	100815268	beta-glucosidase BoGH3B
mtr-u.5	11437277	beta-glucosidase BoGH3B
mtr-u.5	25495861	beta-glucosidase BoGH3B
mtr-u.5	25495860	beta-glucosidase BoGH3B
ath-u.5	AT5G20950	Glycosyl hydrolase family protein
ath-u.5	AT5G04885	Glycosyl hydrolase family protein
bra-r.6	103845624	beta-glucosidase BoGH3B
bra-r.6	103856474	beta-glucosidase BoGH3B
bra-r.6	103847250	beta-glucosidase BoGH3B
vvi-u.5	100246224	uncharacterized LOC100246224
vvi-u.5	100254789	uncharacterized LOC100254789
ghi-r.1	107893769	beta-glucosidase BoGH3B
ghi-r.1	107904388	beta-glucosidase BoGH3B
ghi-r.1	107941931	beta-glucosidase BoGH3B
bna-r.1	106419470	beta-glucosidase BoGH3B
bna-r.1	106425725	beta-glucosidase BoGH3B
bna-r.1	106428191	lysosomal beta glucosidase-like
cit-r.1	127900830	uncharacterized LOC127900830
sly-u.5	101254239	uncharacterized LOC101254239
sly-u.5	101247513	uncharacterized LOC101247513
sly-u.5	101250040	uncharacterized LOC101250040
sot-r.1	102586879	beta-glucosidase BoGH3B-like
sot-r.1	102587222	beta-glucosidase BoGH3B-like
sot-r.1	102586545	beta-glucosidase BoGH3B-like
nta-r.1	107785592	uncharacterized LOC107785592
nta-r.1	107794849	uncharacterized LOC107794849
osa-u.5	4334116	uncharacterized LOC4334116
osa-u.5	4328197	uncharacterized LOC4328197
osa-u.5	4324619	uncharacterized LOC4324619
zma-u.5	542684	beta-glucanase
zma-u.5	100280148	uncharacterized LOC100280148
zma-u.5	100191390	uncharacterized LOC100191390
tae-r.2	123105034	beta-glucosidase BoGH3B
tae-r.2	123070932	beta-glucosidase BoGH3B
tae-r.2	123107833	beta-glucosidase BoGH3B
hvu-r.1	123452240	beta-glucosidase BoGH3B-like
hvu-r.1	123452238	beta-glucosidase BoGH3B-like
hvu-r.1	123452236	beta-glucosidase BoGH3B-like
sbi-r.1	110437359	beta-glucosidase BoGH3B-like
sbi-r.1	8069922	beta-glucosidase BoGH3B
bdi-r.1	100822901	beta-glucosidase BoGH3B
bdi-r.1	100824235	beta-glucosidase BoGH3B
bdi-r.1	100846247	beta-glucosidase BoGH3B

Top 50 coexpressed genes to 7469892 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7469892 (ppo-u.5 coexpression data)

CoexMap"7469892"

[Cytoscape]

Annotation

functional annotation

KEGG

pop00460 [list] [network] Cyanoamino acid metabolism (53 genes)

pop00500 [list] [network] Starch and sucrose metabolism (188 genes)

pop00999 [list] [network] Biosynthesis of various plant secondary metabolites (81 genes)

GO BP

GO:0009251 [list] [network] glucan catabolic process

(15 genes)

IEA

GO CC

GO MF

GO:0008422 [list] [network] beta-glucosidase activity

(49 genes)

IEA

Protein

XP_006371173.2 [sequence] [blastp]

Subcellular
localization
wolf

E.R. 4, nucl 1, cyto_nucl 1, E.R._plas 1, vacu 1, cyto 1

(predict for XP_006371173.2)

Subcellular
localization
TargetP

scret 9

(predict for XP_006371173.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7469892	ppo-r.4 for 7469892	ppo-m.4 for 7469892	ppo-u.5 for 7478601	gma-u.5 for 100816705	gma-u.5 for 100815268	mtr-u.5 for 11437277	mtr-u.5 for 25495861	mtr-u.5 for 25495860	ath-u.5 for AT5G20950	ath-u.5 for AT5G04885	bra-r.6 for 103845624	bra-r.6 for 103856474	bra-r.6 for 103847250	vvi-u.5 for 100246224	vvi-u.5 for 100254789	ghi-r.1 for 107893769	ghi-r.1 for 107904388	ghi-r.1 for 107941931	bna-r.1 for 106419470	bna-r.1 for 106425725	bna-r.1 for 106428191	cit-r.1 for 127900830	sly-u.5 for 101254239	sly-u.5 for 101247513	sly-u.5 for 101250040	sot-r.1 for 102586879	sot-r.1 for 102587222	sot-r.1 for 102586545	nta-r.1 for 107785592	nta-r.1 for 107794849	osa-u.5 for 4334116	osa-u.5 for 4328197	osa-u.5 for 4324619	zma-u.5 for 542684	zma-u.5 for 100280148	zma-u.5 for 100191390	tae-r.2 for 123105034	tae-r.2 for 123070932	tae-r.2 for 123107833	hvu-r.1 for 123452240	hvu-r.1 for 123452238	hvu-r.1 for 123452236	sbi-r.1 for 110437359	sbi-r.1 for 8069922	bdi-r.1 for 100822901	bdi-r.1 for 100824235	bdi-r.1 for 100846247

Ortholog

Ortholog ID: 414

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC7469892

uncharacterized LOC18101285

beta-glucosidase BoGH3B

Glycosyl hydrolase family protein

beta-glucosidase BoGH3B

uncharacterized LOC100254789

beta-glucosidase BoGH3B

lysosomal beta glucosidase-like

beta-glucosidase BoGH3B

uncharacterized LOC102614874

uncharacterized LOC101254239

uncharacterized LOC101247513

uncharacterized LOC101266947

beta-glucosidase BoGH3B-like

uncharacterized LOC107765533

uncharacterized LOC107784216

uncharacterized LOC107765532

uncharacterized LOC4328197

uncharacterized LOC4324619

uncharacterized LOC100280148

uncharacterized LOC541703

beta-glucosidase BoGH3B

lysosomal beta glucosidase

beta-glucosidase BoGH3B

beta-glucosidase BoGH3B-like

beta-glucosidase BoGH3B

beta-glucosidase BoGH3B-like

beta-glucosidase BoGH3B

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	5
ppo04075	Plant hormone signal transduction	5
ppo00052	Galactose metabolism	3
ppo00511	Other glycan degradation	3
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01230	Biosynthesis of amino acids	6
ppo00400	Phenylalanine, tyrosine and tryptophan biosynthesis	5
ppo00500	Starch and sucrose metabolism	4
ppo00999	Biosynthesis of various plant secondary metabolites	3
ppo00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	5
gma04145	Phagosome	5
gma04142	Lysosome	4
gma00460	Cyanoamino acid metabolism	2
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00460	Cyanoamino acid metabolism	2
gma00500	Starch and sucrose metabolism	2
gma00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	4
mtr00010	Glycolysis / Gluconeogenesis	3
mtr00020	Citrate cycle (TCA cycle)	3
mtr00710	Carbon fixation by Calvin cycle	3
mtr01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	4
mtr00010	Glycolysis / Gluconeogenesis	3
mtr00710	Carbon fixation by Calvin cycle	3
mtr01250	Biosynthesis of nucleotide sugars	2
mtr00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	10
ath00510	N-Glycan biosynthesis	6
ath00513	Various types of N-glycan biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00511	Other glycan degradation	3
bra01240	Biosynthesis of cofactors	2
bra00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00460	Cyanoamino acid metabolism	2
ghi00500	Starch and sucrose metabolism	2
ghi00999	Biosynthesis of various plant secondary metabolites	2
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00460	Cyanoamino acid metabolism	2
ghi00500	Starch and sucrose metabolism	2
ghi00999	Biosynthesis of various plant secondary metabolites	2
ghi00940	Phenylpropanoid biosynthesis	2
ghi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2
ghi00460	Cyanoamino acid metabolism	2
ghi00500	Starch and sucrose metabolism	2
ghi00999	Biosynthesis of various plant secondary metabolites	2
ghi00531	Glycosaminoglycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00460	Cyanoamino acid metabolism	4
bna00500	Starch and sucrose metabolism	4
bna00999	Biosynthesis of various plant secondary metabolites	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00460	Cyanoamino acid metabolism	4
bna00500	Starch and sucrose metabolism	4
bna00999	Biosynthesis of various plant secondary metabolites	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00460	Cyanoamino acid metabolism	3
bna00500	Starch and sucrose metabolism	3
bna00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00061	Fatty acid biosynthesis	6
sly01212	Fatty acid metabolism	6
sly00780	Biotin metabolism	3
sly01240	Biosynthesis of cofactors	3
sly00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04712	Circadian rhythm - plant	5
sly00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	4
sly00460	Cyanoamino acid metabolism	2
sly00999	Biosynthesis of various plant secondary metabolites	2
sly00270	Cysteine and methionine metabolism	2
sly04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00460	Cyanoamino acid metabolism	2
sot00500	Starch and sucrose metabolism	2
sot00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00460	Cyanoamino acid metabolism	4
nta00500	Starch and sucrose metabolism	4
nta00999	Biosynthesis of various plant secondary metabolites	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00460	Cyanoamino acid metabolism	4
nta00500	Starch and sucrose metabolism	4
nta00999	Biosynthesis of various plant secondary metabolites	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00460	Cyanoamino acid metabolism	4
nta00500	Starch and sucrose metabolism	4
nta00999	Biosynthesis of various plant secondary metabolites	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	4
osa00061	Fatty acid biosynthesis	2
osa01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00460	Cyanoamino acid metabolism	3
zma00500	Starch and sucrose metabolism	3
zma00999	Biosynthesis of various plant secondary metabolites	3
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00460	Cyanoamino acid metabolism	3
tae00500	Starch and sucrose metabolism	3
tae00999	Biosynthesis of various plant secondary metabolites	3
tae04145	Phagosome	2
tae04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00460	Cyanoamino acid metabolism	5
tae00500	Starch and sucrose metabolism	5
tae00999	Biosynthesis of various plant secondary metabolites	5
tae00010	Glycolysis / Gluconeogenesis	3
tae00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	8
tae00460	Cyanoamino acid metabolism	7
tae00500	Starch and sucrose metabolism	6
tae00999	Biosynthesis of various plant secondary metabolites	6
tae00010	Glycolysis / Gluconeogenesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	2
hvu00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	3
hvu00010	Glycolysis / Gluconeogenesis	2
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00460	Cyanoamino acid metabolism	5
sbi00500	Starch and sucrose metabolism	5
sbi00999	Biosynthesis of various plant secondary metabolites	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00460	Cyanoamino acid metabolism	5
sbi00500	Starch and sucrose metabolism	5
sbi00999	Biosynthesis of various plant secondary metabolites	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00460	Cyanoamino acid metabolism	5
sbi00500	Starch and sucrose metabolism	5
sbi00999	Biosynthesis of various plant secondary metabolites	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	4
bdi00460	Cyanoamino acid metabolism	2
bdi00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	3
bdi00460	Cyanoamino acid metabolism	2
bdi00999	Biosynthesis of various plant secondary metabolites	2
bdi00511	Other glycan degradation	2
bdi00513	Various types of N-glycan biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

7469892

18101285

100775219

100797197

100780572

25495861

25495860

11414411

832220

830368

103856474

103847250

103851390

100254789

107893769

107941931

121229084

106419470

106428191

106371702

102614874

101254239

101247513

101266947

102587222

102583088

107765533

107784216

107765532

4328197

4324619

100280148

541703

103654957

123105031

123105027

123105032

123452236

123452234

123444526

8069922

8069923

110431790

100822901

100846247

100844073

The preparation time of this page was 0.3 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	2	3	2	3	3	1	3	3	2	3	3	3	3	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7469892 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7469892 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**