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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7472501   mediator of RNA polymerase II transcription subunit 33A 
 ppo-r.4   7472501   mediator of RNA polymerase II transcription subunit 33A 
 gma-u.5   100803055   mediator of RNA polymerase II transcription subunit 33A 
 mtr-u.5   11427262   mediator of RNA polymerase II transcription subunit 33A 
 vvi-u.5   100258764   mediator of RNA polymerase II transcription subunit 33A 
 cit-r.1   102621689   mediator of RNA polymerase II transcription subunit 33A-like 
 osa-u.5   4344305   mediator of RNA polymerase II transcription subunit 33A 
 osa-u.5   9270664   mediator of RNA polymerase II transcription subunit 33A 
 zma-u.5   100502369   mediator of RNA polymerase II transcription subunit 33A 
 zma-u.5   100275342   mediator of RNA polymerase II transcription subunit 33A 
 zma-u.5   100193939   uncharacterized LOC100193939 
 tae-r.2   123187463   mediator of RNA polymerase II transcription subunit 33A 
 tae-r.2   123055610   mediator of RNA polymerase II transcription subunit 33A-like 
 tae-r.2   123051540   mediator of RNA polymerase II transcription subunit 33A 
 hvu-r.1   123424696   mediator of RNA polymerase II transcription subunit 33A-like 
 sbi-r.1   8078567   mediator of RNA polymerase II transcription subunit 33A 
 sbi-r.1   8080949   mediator of RNA polymerase II transcription subunit 33A 
 bdi-r.1   100826944   mediator of RNA polymerase II transcription subunit 33A 

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Top 50 coexpressed genes to 7472501 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7472501 (ppo-u.5 coexpression data)

CoexMap"7472501"


ppoLOC7472501 | Entrez gene ID : 7472501    
Species ppo gma mtr vvi cit osa zma tae hvu sbi bdi cre bra ath nta bna sly ghi sot
Paralog 2 1 1 1 1 2 3 3 1 2 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:2000762 [list] [network] regulation of phenylpropanoid metabolic process  (11 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (44 genes)  IEA  
GO MF
Protein XP_024443654.1 [sequence] [blastp]
XP_024443655.1 [sequence] [blastp]
XP_024443656.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_024443654.1)
plas 4,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for XP_024443655.1)
nucl 4,  plas 4,  nucl_plas 4  (predict for XP_024443656.1)
Subcellular
localization
TargetP
other 9  (predict for XP_024443654.1)
other 9  (predict for XP_024443655.1)
other 9  (predict for XP_024443656.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7472501
ppo-r.4
for
7472501
gma-u.5
for
100803055
mtr-u.5
for
11427262
vvi-u.5
for
100258764
cit-r.1
for
102621689
osa-u.5
for
4344305
osa-u.5
for
9270664
zma-u.5
for
100502369
zma-u.5
for
100275342
zma-u.5
for
100193939
tae-r.2
for
123187463
tae-r.2
for
123055610
tae-r.2
for
123051540
hvu-r.1
for
123424696
sbi-r.1
for
8078567
sbi-r.1
for
8080949
bdi-r.1
for
100826944


Ortholog ID: 12743
Species ppo gma mtr vvi cit osa osa zma zma zma tae tae tae hvu sbi sbi bdi
Symbol LOC7472501 LOC100803055 LOC11427262 LOC100258764 LOC102621689 LOC4344305 LOC9270664 LOC100502369 LOC100275342 LOC100193939 LOC123187463 LOC123051540 LOC123043670 LOC123424696 LOC8078567 LOC8080949 LOC100826944
Function* mediator of RNA polymerase II transcription subunit 33A mediator of RNA polymerase II transcription subunit 33A mediator of RNA polymerase II transcription subunit 33A mediator of RNA polymerase II transcription subunit 33A mediator of RNA polymerase II transcription subunit 33A-like mediator of RNA polymerase II transcription subunit 33A mediator of RNA polymerase II transcription subunit 33A mediator of RNA polymerase II transcription subunit 33A mediator of RNA polymerase II transcription subunit 33A uncharacterized LOC100193939 mediator of RNA polymerase II transcription subunit 33A mediator of RNA polymerase II transcription subunit 33A mediator of RNA polymerase II transcription subunit 33A mediator of RNA polymerase II transcription subunit 33A-like mediator of RNA polymerase II transcription subunit 33A mediator of RNA polymerase II transcription subunit 33A mediator of RNA polymerase II transcription subunit 33A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00670 One carbon pool by folate 3
vvi01200 Carbon metabolism 2
vvi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu00513 Various types of N-glycan biosynthesis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
sbi03040 Spliceosome 2
sbi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi03013 Nucleocytoplasmic transport 2
sbi04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7472501 100803055 11427262 100258764 102621689 4344305 9270664 100502369 100275342 100193939 123187463 123051540 123043670 123424696 8078567 8080949 100826944
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