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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7474694   pentatricopeptide repeat-containing protein At2g36240 
 ppo-r.4   7474694   pentatricopeptide repeat-containing protein At2g36240 
 ppo-m.4   7474694   pentatricopeptide repeat-containing protein At2g36240 
 gma-u.5   100796880   pentatricopeptide repeat-containing protein At2g36240 
 mtr-u.5   120575720   pentatricopeptide repeat-containing protein At2g36240 
 ath-u.5   AT2G36240   pentatricopeptide (PPR) repeat-containing protein 
 bra-r.6   103867301   pentatricopeptide repeat-containing protein At2g36240 
 vvi-u.5   100263464   pentatricopeptide repeat-containing protein At2g36240 
 ghi-r.1   107899234   pentatricopeptide repeat-containing protein At2g36240 
 ghi-r.1   107948383   pentatricopeptide repeat-containing protein At2g36240 
 bna-r.1   125599962   pentatricopeptide repeat-containing protein At2g36240-like 
 bna-r.1   125606399   pentatricopeptide repeat-containing protein At2g36240-like 
 cit-r.1   102622073   pentatricopeptide repeat-containing protein At2g36240 
 sly-u.5   101261049   pentatricopeptide repeat-containing protein At2g36240 
 sot-r.1   102604446   pentatricopeptide repeat-containing protein At2g36240 
 nta-r.1   107805252   uncharacterized LOC107805252 
 osa-u.5   4324863   pentatricopeptide repeat-containing protein At2g36240 
 zma-u.5   100274616   Pentatricopeptide repeat-containing protein 
 tae-r.2   123071882   pentatricopeptide repeat-containing protein At2g36240 
 tae-r.2   123080193   pentatricopeptide repeat-containing protein At2g36240 
 sbi-r.1   8078707   pentatricopeptide repeat-containing protein At2g36240 
 bdi-r.1   100830807   pentatricopeptide repeat-containing protein At2g36240 

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Top 50 coexpressed genes to 7474694 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7474694 (ppo-u.5 coexpression data)

CoexMap"7474694"


ppoLOC7474694 | Entrez gene ID : 7474694    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae sbi bdi cre hvu
Paralog 3 1 1 1 1 1 2 2 1 1 1 1 1 1 2 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024459664.1 [sequence] [blastp]
XP_024459665.1 [sequence] [blastp]
XP_024459666.1 [sequence] [blastp]
XP_024459667.1 [sequence] [blastp]
XP_024459668.1 [sequence] [blastp]
XP_052309770.1 [sequence] [blastp]
XP_052309771.1 [sequence] [blastp]
XP_052309772.1 [sequence] [blastp]
XP_052309773.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  nucl 1  (predict for XP_024459664.1)
cyto 9,  nucl 1  (predict for XP_024459665.1)
cyto 9,  nucl 1  (predict for XP_024459666.1)
cyto 9,  nucl 1  (predict for XP_024459667.1)
cyto 9,  nucl 1  (predict for XP_024459668.1)
cyto 9,  nucl 1  (predict for XP_052309770.1)
cyto 9,  nucl 1  (predict for XP_052309771.1)
cyto 9,  nucl 1  (predict for XP_052309772.1)
cyto 9,  nucl 1  (predict for XP_052309773.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_024459664.1)
chlo 5  (predict for XP_024459665.1)
chlo 5  (predict for XP_024459666.1)
chlo 5  (predict for XP_024459667.1)
chlo 5  (predict for XP_024459668.1)
chlo 5  (predict for XP_052309770.1)
chlo 5  (predict for XP_052309771.1)
chlo 5  (predict for XP_052309772.1)
chlo 5  (predict for XP_052309773.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7474694
ppo-r.4
for
7474694
ppo-m.4
for
7474694
gma-u.5
for
100796880
mtr-u.5
for
120575720
ath-u.5
for
AT2G36240
bra-r.6
for
103867301
vvi-u.5
for
100263464
ghi-r.1
for
107899234
ghi-r.1
for
107948383
bna-r.1
for
125599962
bna-r.1
for
125606399
cit-r.1
for
102622073
sly-u.5
for
101261049
sot-r.1
for
102604446
nta-r.1
for
107805252
osa-u.5
for
4324863
zma-u.5
for
100274616
tae-r.2
for
123071882
tae-r.2
for
123080193
sbi-r.1
for
8078707
bdi-r.1
for
100830807


Ortholog ID: 7944
Species ppo gma mtr ath bra vvi ghi ghi bna bna cit sly sot nta osa zma tae tae sbi bdi
Symbol LOC7474694 LOC100796880 LOC120575720 AT2G36240 LOC103867301 LOC100263464 LOC107899234 LOC107948383 LOC125609286 LOC106390618 LOC102622073 LOC101261049 LOC102604446 LOC107805252 LOC4324863 LOC100274616 LOC123080193 LOC123080200 LOC8078707 LOC100830807
Function* pentatricopeptide repeat-containing protein At2g36240 pentatricopeptide repeat-containing protein At2g36240 pentatricopeptide repeat-containing protein At2g36240 pentatricopeptide (PPR) repeat-containing protein pentatricopeptide repeat-containing protein At2g36240 pentatricopeptide repeat-containing protein At2g36240 pentatricopeptide repeat-containing protein At2g36240 pentatricopeptide repeat-containing protein At2g36240 pentatricopeptide repeat-containing protein At2g36240-like pentatricopeptide repeat-containing protein At2g36240-like pentatricopeptide repeat-containing protein At2g36240 pentatricopeptide repeat-containing protein At2g36240 pentatricopeptide repeat-containing protein At2g36240 uncharacterized LOC107805252 pentatricopeptide repeat-containing protein At2g36240 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At2g36240 pentatricopeptide repeat-containing protein At2g36240 pentatricopeptide repeat-containing protein At2g36240 pentatricopeptide repeat-containing protein At2g36240
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7474694 100796880 120575720 818196 103867301 100263464 107899234 107948383 125609286 106390618 102622073 101261049 102604446 107805252 4324863 100274616 123080193 123080200 8078707 100830807
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