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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7474831   putative pentatricopeptide repeat-containing protein At1g31840 
 ppo-r.4   7474831   putative pentatricopeptide repeat-containing protein At1g31840 
 ppo-m.4   7474831   putative pentatricopeptide repeat-containing protein At1g31840 
 vvi-u.5   104882747   putative pentatricopeptide repeat-containing protein At1g31840 
 ghi-r.1   107916769   putative pentatricopeptide repeat-containing protein At1g31840 
 ghi-r.1   107916883   putative pentatricopeptide repeat-containing protein At1g31840 
 cit-r.1   102610143   putative pentatricopeptide repeat-containing protein At1g31840 
 cit-r.1   112495893   putative pentatricopeptide repeat-containing protein At1g31840 
 nta-r.1   107785709   uncharacterized LOC107785709 

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Top 50 coexpressed genes to 7474831 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7474831 (ppo-u.5 coexpression data)

CoexMap"7474831"


ppoLOC7474831 | Entrez gene ID : 7474831    
Species ppo vvi ghi cit nta cre bra ath mtr hvu bna tae bdi osa gma zma sly sot sbi
Paralog 3 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002322117.3 [sequence] [blastp]
XP_024442383.1 [sequence] [blastp]
XP_024442384.1 [sequence] [blastp]
XP_024442385.1 [sequence] [blastp]
XP_024442386.1 [sequence] [blastp]
XP_024442388.1 [sequence] [blastp]
XP_024442389.1 [sequence] [blastp]
XP_024442390.1 [sequence] [blastp]
XP_024442391.1 [sequence] [blastp]
XP_024442392.1 [sequence] [blastp]
XP_024442393.1 [sequence] [blastp]
XP_024442394.1 [sequence] [blastp]
XP_024442395.1 [sequence] [blastp]
XP_024442397.1 [sequence] [blastp]
XP_052303612.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 1,  golg 1,  nucl 1,  plas 1,  vacu 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_002322117.3)
chlo 5,  mito 1,  golg 1,  nucl 1,  plas 1,  vacu 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_024442383.1)
chlo 5,  mito 1,  golg 1,  nucl 1,  plas 1,  vacu 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_024442384.1)
chlo 5,  mito 1,  golg 1,  nucl 1,  plas 1,  vacu 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_024442385.1)
chlo 5,  mito 1,  golg 1,  nucl 1,  plas 1,  vacu 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_024442386.1)
chlo 5,  mito 1,  golg 1,  nucl 1,  plas 1,  vacu 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_024442388.1)
chlo 5,  mito 1,  golg 1,  nucl 1,  plas 1,  vacu 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_024442389.1)
chlo 5,  mito 1,  golg 1,  nucl 1,  plas 1,  vacu 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_024442390.1)
chlo 5,  mito 1,  golg 1,  nucl 1,  plas 1,  vacu 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_024442391.1)
chlo 5,  mito 1,  golg 1,  nucl 1,  plas 1,  vacu 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_024442392.1)
chlo 5,  mito 1,  golg 1,  nucl 1,  plas 1,  vacu 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_024442393.1)
chlo 5,  mito 1,  golg 1,  nucl 1,  plas 1,  vacu 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_024442394.1)
nucl 4,  chlo 2,  chlo_mito 1,  cyto 1,  E.R. 1,  golg 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_024442395.1)
nucl 4,  chlo 2,  chlo_mito 1,  cyto 1,  E.R. 1,  golg 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_024442397.1)
chlo 5,  mito 1,  golg 1,  nucl 1,  plas 1,  vacu 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_052303612.1)
Subcellular
localization
TargetP
scret 4  (predict for XP_002322117.3)
scret 4  (predict for XP_024442383.1)
scret 4  (predict for XP_024442384.1)
scret 4  (predict for XP_024442385.1)
scret 4  (predict for XP_024442386.1)
scret 4  (predict for XP_024442388.1)
scret 4  (predict for XP_024442389.1)
scret 4  (predict for XP_024442390.1)
scret 4  (predict for XP_024442391.1)
scret 4  (predict for XP_024442392.1)
scret 4  (predict for XP_024442393.1)
scret 4  (predict for XP_024442394.1)
other 7  (predict for XP_024442395.1)
other 7  (predict for XP_024442397.1)
scret 4  (predict for XP_052303612.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7474831
ppo-r.4
for
7474831
ppo-m.4
for
7474831
vvi-u.5
for
104882747
ghi-r.1
for
107916769
ghi-r.1
for
107916883
cit-r.1
for
102610143
cit-r.1
for
112495893
nta-r.1
for
107785709


Ortholog ID: 16851
Species ppo vvi ghi ghi cit cit nta
Symbol LOC7474831 LOC104882747 LOC107916769 LOC107916883 LOC102610143 LOC112495893 LOC107785709
Function* putative pentatricopeptide repeat-containing protein At1g31840 putative pentatricopeptide repeat-containing protein At1g31840 putative pentatricopeptide repeat-containing protein At1g31840 putative pentatricopeptide repeat-containing protein At1g31840 putative pentatricopeptide repeat-containing protein At1g31840 putative pentatricopeptide repeat-containing protein At1g31840 uncharacterized LOC107785709
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7474831 104882747 107916769 107916883 102610143 112495893 107785709
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