ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7475968	uncharacterized LOC7475968
ppo-r.4	7475968	uncharacterized LOC7475968
ppo-m.4	7475968	uncharacterized LOC7475968
ath-u.5	AT3G23370	RNA-binding (RRM/RBD/RNP motifs) family protein
bra-r.6	103828748	uncharacterized LOC103828748
vvi-u.5	104879293	uncharacterized LOC104879293
ghi-r.1	107915482	uncharacterized LOC107915482
bna-r.1	BNAC07G08130D	uncharacterized BNAC07G08130D
bna-r.1	106357888	uncharacterized LOC106357888
sly-u.5	101262563	probable GPI-anchored adhesin-like protein PGA55
sot-r.1	102583645	uncharacterized LOC102583645
nta-r.1	107769893	uncharacterized LOC107769893
nta-r.1	107817073	uncharacterized LOC107817073

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003723 [list] [network] RNA binding

(1480 genes)

IEA

Protein

XP_052312392.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, nucl 1, plas 1, E.R. 1, cyto_nucl 1, cysk_nucl 1, E.R._plas 1

(predict for XP_052312392.1)

Subcellular
localization
TargetP

mito 6

(predict for XP_052312392.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7475968	ppo-r.4 for 7475968	ppo-m.4 for 7475968	ath-u.5 for AT3G23370	bra-r.6 for 103828748	vvi-u.5 for 104879293	ghi-r.1 for 107915482	bna-r.1 for BNAC07G08130D	bna-r.1 for 106357888	sly-u.5 for 101262563	sot-r.1 for 102583645	nta-r.1 for 107769893	nta-r.1 for 107817073

Ortholog ID: 14734

Species

ppo

ath

bra

vvi

ghi

bna

sly

sot

nta

Symbol

Function^*

uncharacterized LOC7475968

RNA-binding (RRM/RBD/RNP motifs) family protein

uncharacterized LOC103828748

uncharacterized LOC104879293

uncharacterized LOC107915482

uncharacterized BNAC07G08130D

uncharacterized LOC106357888

probable GPI-anchored adhesin-like protein PGA55

uncharacterized LOC102583645

uncharacterized LOC107769893

uncharacterized LOC107817073

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	3
vvi03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00670	One carbon pool by folate	2
ghi04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	4
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	2
bna03013	Nucleocytoplasmic transport	2
bna03015	mRNA surveillance pathway	2
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03020	RNA polymerase	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03030	DNA replication	2
nta03410	Base excision repair	2
nta03420	Nucleotide excision repair	2
nta03430	Mismatch repair	2

Expression

Expression pattern

Entrez Gene ID^*

7475968

821918

103828748

104879293

107915482

106421403

106357888

101262563

102583645

107769893

107817073

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7475968 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7475968 (ppo-u.5 coexpression data)


Species	ppo	ath	bra	vvi	ghi	bna	sly	sot	nta	sbi	osa	gma	cit	mtr	tae	hvu	zma	cre	bdi
Paralog	3	1	1	1	1	2	1	1	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7475968 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7475968 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**