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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7477080   eukaryotic translation initiation factor 4B2 
 ppo-r.4   7477080   eukaryotic translation initiation factor 4B2 
 ppo-u.5   7473205   eukaryotic translation initiation factor 4B2 
 gma-u.5   100784238   eukaryotic translation initiation factor 4B2 
 gma-u.5   100803366   eukaryotic translation initiation factor 4B2 
 mtr-u.5   25501848   eukaryotic translation initiation factor 4B2 
 ath-u.5   EIF4B1   eukaryotic translation initiation factor 4B1 
 ath-u.5   EIF4B2   eukaryotic initiation factor 4B2 
 bra-r.6   103836129   eukaryotic translation initiation factor 4B2 
 bra-r.6   103875302   eukaryotic translation initiation factor 4B1 
 bra-r.6   103843089   eukaryotic translation initiation factor 4B2 
 vvi-u.5   100242447   eukaryotic translation initiation factor 4B2 
 ghi-r.1   107909714   eukaryotic translation initiation factor 4B2 
 ghi-r.1   107922300   eukaryotic translation initiation factor 4B2 
 ghi-r.1   107886527   eukaryotic translation initiation factor 4B2 
 bna-r.1   106362061   eukaryotic translation initiation factor 4B2-like 
 bna-r.1   106412557   eukaryotic translation initiation factor 4B2 
 cit-r.1   102618826   eukaryotic translation initiation factor 4B2 
 sly-u.5   101245057   eukaryotic translation initiation factor 4B1 
 sot-r.1   102578247   eukaryotic translation initiation factor 4B1 
 nta-r.1   107763159   eukaryotic translation initiation factor 4B2-like 
 nta-r.1   107789198   eukaryotic translation initiation factor 4B2 
 osa-u.5   4329860   eukaryotic translation initiation factor 4B1 
 osa-u.5   4336174   eukaryotic translation initiation factor 4B1 
 zma-u.5   100191989   uncharacterized LOC100191989 
 zma-u.5   100304283   Eukaryotic translation initiation factor 4B2 
 zma-u.5   100284982   eukaryotic translation initiation factor 4B 
 tae-r.2   123045763   eukaryotic translation initiation factor 4B1-like 
 tae-r.2   123189538   eukaryotic translation initiation factor 4B1-like 
 tae-r.2   543417   eukaryotic translation initiation factor 4B1-like 
 hvu-r.1   123427012   eukaryotic translation initiation factor 4B1 
 sbi-r.1   8070605   eukaryotic translation initiation factor 4B1 
 sbi-r.1   8073589   eukaryotic translation initiation factor 4B1 
 bdi-r.1   100830446   eukaryotic translation initiation factor 4B1 
 bdi-r.1   100844636   eukaryotic translation initiation factor 4B1 
 cre-r.1   CHLRE_16g688050v5   uncharacterized protein 

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Top 50 coexpressed genes to 7477080 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7477080 (ppo-u.5 coexpression data)

CoexMap"7477080"


ppoLOC7477080 | Entrez gene ID : 7477080    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 2 3 1 3 2 1 1 1 2 2 3 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (90 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (348 genes)  IEA  
Protein XP_002314589.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002314589.2)
Subcellular
localization
TargetP
other 7  (predict for XP_002314589.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7477080
ppo-r.4
for
7477080
ppo-u.5
for
7473205
gma-u.5
for
100784238
gma-u.5
for
100803366
mtr-u.5
for
25501848
ath-u.5
for
EIF4B1
ath-u.5
for
EIF4B2
bra-r.6
for
103836129
bra-r.6
for
103875302
bra-r.6
for
103843089
vvi-u.5
for
100242447
ghi-r.1
for
107909714
ghi-r.1
for
107922300
ghi-r.1
for
107886527
bna-r.1
for
106362061
bna-r.1
for
106412557
cit-r.1
for
102618826
sly-u.5
for
101245057
sot-r.1
for
102578247
nta-r.1
for
107763159
nta-r.1
for
107789198
osa-u.5
for
4329860
osa-u.5
for
4336174
zma-u.5
for
100191989
zma-u.5
for
100304283
zma-u.5
for
100284982
tae-r.2
for
123045763
tae-r.2
for
123189538
tae-r.2
for
543417
hvu-r.1
for
123427012
sbi-r.1
for
8070605
sbi-r.1
for
8073589
bdi-r.1
for
100830446
bdi-r.1
for
100844636
cre-r.1
for
CHLRE_16g688050v5


Ortholog ID: 4562
Species ppo ppo gma gma mtr ath ath bra bra bra vvi ghi ghi ghi bna bna bna cit sly sot nta nta osa osa zma zma zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol LOC7477080 LOC7473205 LOC100784238 LOC100803366 LOC25501848 EIF4B1 EIF4B2 LOC103836129 LOC103875302 LOC103843089 LOC100242447 LOC107909714 LOC107922300 LOC107886527 LOC106412557 LOC106382364 LOC106349337 LOC102618826 LOC101245057 LOC102578247 LOC107763159 LOC107789198 LOC4329860 LOC4336174 LOC100191989 LOC100304283 LOC100284982 LOC123045763 LOC123189538 LOC543417 LOC123427012 LOC8070605 LOC8073589 LOC100830446 LOC100844636 CHLRE_16g688050v5
Function* eukaryotic translation initiation factor 4B2 eukaryotic translation initiation factor 4B2 eukaryotic translation initiation factor 4B2 eukaryotic translation initiation factor 4B2 eukaryotic translation initiation factor 4B2 eukaryotic translation initiation factor 4B1 eukaryotic initiation factor 4B2 eukaryotic translation initiation factor 4B2 eukaryotic translation initiation factor 4B1 eukaryotic translation initiation factor 4B2 eukaryotic translation initiation factor 4B2 eukaryotic translation initiation factor 4B2 eukaryotic translation initiation factor 4B2 eukaryotic translation initiation factor 4B2 eukaryotic translation initiation factor 4B2 eukaryotic translation initiation factor 4B2 eukaryotic translation initiation factor 4B1-like eukaryotic translation initiation factor 4B2 eukaryotic translation initiation factor 4B1 eukaryotic translation initiation factor 4B1 eukaryotic translation initiation factor 4B2-like eukaryotic translation initiation factor 4B2 eukaryotic translation initiation factor 4B1 eukaryotic translation initiation factor 4B1 uncharacterized LOC100191989 Eukaryotic translation initiation factor 4B2 eukaryotic translation initiation factor 4B eukaryotic translation initiation factor 4B1-like eukaryotic translation initiation factor 4B1-like eukaryotic translation initiation factor 4B1-like eukaryotic translation initiation factor 4B1 eukaryotic translation initiation factor 4B1 eukaryotic translation initiation factor 4B1 eukaryotic translation initiation factor 4B1 eukaryotic translation initiation factor 4B1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma04712 Circadian rhythm - plant 2
gma04016 MAPK signaling pathway - plant 2
gma04070 Phosphatidylinositol signaling system 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr00513 Various types of N-glycan biosynthesis 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 4
ath03040 Spliceosome 3
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03015 mRNA surveillance pathway 3
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03015 mRNA surveillance pathway 3
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 3
bna04070 Phosphatidylinositol signaling system 3
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 3
nta04144 Endocytosis 3
nta05100 Bacterial invasion of epithelial cells 3
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta04142 Lysosome 2
nta04144 Endocytosis 2
nta05100 Bacterial invasion of epithelial cells 2
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa03015 mRNA surveillance pathway 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 5
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma00010 Glycolysis / Gluconeogenesis 2
zma00051 Fructose and mannose metabolism 2
zma00052 Galactose metabolism 2
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
hvu03015 mRNA surveillance pathway 2
hvu00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 3
sbi03082 ATP-dependent chromatin remodeling 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7477080 7473205 100784238 100803366 25501848 822244 837859 103836129 103875302 103843089 100242447 107909714 107922300 107886527 106412557 106382364 106349337 102618826 101245057 102578247 107763159 107789198 4329860 4336174 100191989 100304283 100284982 123045763 123189538 543417 123427012 8070605 8073589 100830446 100844636 5717678
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