ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7477134	probable ATP synthase 24 kDa subunit, mitochondrial
ppo-r.4	7477134	probable ATP synthase 24 kDa subunit, mitochondrial
ppo-m.4	7477134	probable ATP synthase 24 kDa subunit, mitochondrial
ppo-u.5	7456270	probable ATP synthase 24 kDa subunit, mitochondrial
gma-u.5	102668668	probable ATP synthase 24 kDa subunit, mitochondrial
gma-u.5	100811840	probable ATP synthase 24 kDa subunit, mitochondrial
gma-u.5	100787656	probable ATP synthase 24 kDa subunit, mitochondrial
mtr-u.5	11436178	probable ATP synthase 24 kDa subunit, mitochondrial
ath-u.5	MGP1	MALE GAMETOPHYTE DEFECTIVE 1
bra-r.6	103864300	probable ATP synthase 24 kDa subunit, mitochondrial
bra-r.6	103842493	probable ATP synthase 24 kDa subunit, mitochondrial
vvi-u.5	100254399	probable ATP synthase 24 kDa subunit, mitochondrial
ghi-r.1	107911656	probable ATP synthase 24 kDa subunit, mitochondrial
ghi-r.1	107899569	probable ATP synthase 24 kDa subunit, mitochondrial
ghi-r.1	107946977	probable ATP synthase 24 kDa subunit, mitochondrial
bna-r.1	106415980	probable ATP synthase 24 kDa subunit, mitochondrial
bna-r.1	106376931	probable ATP synthase 24 kDa subunit, mitochondrial
bna-r.1	106365957	probable ATP synthase 24 kDa subunit, mitochondrial
cit-r.1	102624633	probable ATP synthase 24 kDa subunit, mitochondrial
sly-u.5	101262000	probable ATP synthase 24 kDa subunit, mitochondrial
sot-r.1	102606142	probable ATP synthase 24 kDa subunit, mitochondrial
nta-r.1	107776369	putative ATP synthase 24 kDa subunit, mitochondrial
nta-r.1	107807235	putative ATP synthase 24 kDa subunit, mitochondrial
osa-u.5	4328196	probable ATP synthase 24 kDa subunit, mitochondrial
zma-u.5	100283802	uncharacterized LOC100283802
zma-u.5	100193873	uncharacterized LOC100193873
zma-u.5	103649420	probable ATP synthase 24 kDa subunit, mitochondrial
tae-r.2	123143582	probable ATP synthase 24 kDa subunit, mitochondrial
tae-r.2	123132042	probable ATP synthase 24 kDa subunit, mitochondrial
tae-r.2	543158	probable ATP synthase 24 kDa subunit, mitochondrial
hvu-r.1	123401843	probable ATP synthase 24 kDa subunit, mitochondrial
sbi-r.1	8057513	probable ATP synthase 24 kDa subunit, mitochondrial
bdi-r.1	100838105	probable ATP synthase 24 kDa subunit, mitochondrial

Top 50 coexpressed genes to 7477134 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7477134 (ppo-u.5 coexpression data)

CoexMap"7477134"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0009555 [list] [network] pollen development

(7 genes)

IEA

GO CC

GO MF

Protein

XP_002306357.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 6, chlo 3

(predict for XP_002306357.1)

Subcellular
localization
TargetP

mito 9

(predict for XP_002306357.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7477134	ppo-r.4 for 7477134	ppo-m.4 for 7477134	ppo-u.5 for 7456270	gma-u.5 for 102668668	gma-u.5 for 100811840	gma-u.5 for 100787656	mtr-u.5 for 11436178	ath-u.5 for MGP1	bra-r.6 for 103864300	bra-r.6 for 103842493	vvi-u.5 for 100254399	ghi-r.1 for 107911656	ghi-r.1 for 107899569	ghi-r.1 for 107946977	bna-r.1 for 106415980	bna-r.1 for 106376931	bna-r.1 for 106365957	cit-r.1 for 102624633	sly-u.5 for 101262000	sot-r.1 for 102606142	nta-r.1 for 107776369	nta-r.1 for 107807235	osa-u.5 for 4328196	zma-u.5 for 100283802	zma-u.5 for 100193873	zma-u.5 for 103649420	tae-r.2 for 123143582	tae-r.2 for 123132042	tae-r.2 for 543158	hvu-r.1 for 123401843	sbi-r.1 for 8057513	bdi-r.1 for 100838105

Ortholog

Ortholog ID: 6496

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

MGP1

Function^*

probable ATP synthase 24 kDa subunit, mitochondrial

MALE GAMETOPHYTE DEFECTIVE 1

probable ATP synthase 24 kDa subunit, mitochondrial

putative ATP synthase 24 kDa subunit, mitochondrial

probable ATP synthase 24 kDa subunit, mitochondrial

uncharacterized LOC100283802

uncharacterized LOC100193873

probable ATP synthase 24 kDa subunit, mitochondrial

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	7
ppo03050	Proteasome	2
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	11
gma00020	Citrate cycle (TCA cycle)	3
gma01200	Carbon metabolism	3
gma00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	10
gma00020	Citrate cycle (TCA cycle)	3
gma01200	Carbon metabolism	3
gma00640	Propanoate metabolism	2
gma03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	9
gma04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	4
mtr00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	11
ath00020	Citrate cycle (TCA cycle)	2
ath00640	Propanoate metabolism	2
ath01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	6
bra00020	Citrate cycle (TCA cycle)	2
bra01200	Carbon metabolism	2
bra00230	Purine metabolism	2
bra00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	5
ghi00561	Glycerolipid metabolism	2
ghi03060	Protein export	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	6
ghi00561	Glycerolipid metabolism	2
ghi03060	Protein export	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	5
ghi00561	Glycerolipid metabolism	2
ghi03060	Protein export	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	3
bna00240	Pyrimidine metabolism	3
bna01232	Nucleotide metabolism	3
bna01240	Biosynthesis of cofactors	3
bna04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	3
bna00240	Pyrimidine metabolism	3
bna01232	Nucleotide metabolism	3
bna01240	Biosynthesis of cofactors	3
bna04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	3
bna00240	Pyrimidine metabolism	3
bna01232	Nucleotide metabolism	3
bna01240	Biosynthesis of cofactors	3
bna04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	4
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	8
sly03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	6
nta00240	Pyrimidine metabolism	4
nta01240	Biosynthesis of cofactors	4
nta00190	Oxidative phosphorylation	3
nta00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	6
nta00240	Pyrimidine metabolism	3
nta01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	8
zma00010	Glycolysis / Gluconeogenesis	3
zma01200	Carbon metabolism	3
zma01230	Biosynthesis of amino acids	3
zma00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	8
zma01230	Biosynthesis of amino acids	3
zma00010	Glycolysis / Gluconeogenesis	2
zma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01230	Biosynthesis of amino acids	5
tae00190	Oxidative phosphorylation	5
tae00350	Tyrosine metabolism	4
tae00360	Phenylalanine metabolism	4
tae00400	Phenylalanine, tyrosine and tryptophan biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	5
tae03060	Protein export	3
tae04141	Protein processing in endoplasmic reticulum	3
tae00270	Cysteine and methionine metabolism	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	10
hvu00020	Citrate cycle (TCA cycle)	2
hvu01200	Carbon metabolism	2
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	4
sbi00541	Biosynthesis of various nucleotide sugars	2
sbi00061	Fatty acid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	11
bdi00020	Citrate cycle (TCA cycle)	5
bdi01200	Carbon metabolism	5
bdi00630	Glyoxylate and dicarboxylate metabolism	2
bdi00640	Propanoate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

7477134

7456270

102668668

100811840

100787656

11436178

816723

103864300

103842493

100254399

107899569

107946977

107922592

106415980

106365957

106420767

102624633

101262000

102606142

107776369

107807235

4328196

100283802

100193873

103649420

123143582

123132042

543158

123401843

8057513

100838105

The preparation time of this page was 2.7 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	1	1	2	1	3	3	1	1	1	2	1	3	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7477134 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7477134 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**