ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7477403	probable hexosyltransferase MUCI70
ppo-r.4	7477403	probable hexosyltransferase MUCI70
ppo-m.4	7477403	probable hexosyltransferase MUCI70
ppo-u.5	7462332	probable hexosyltransferase MUCI70
ppo-u.5	18095581	probable hexosyltransferase MUCI70
ppo-u.5	18103028	probable hexosyltransferase MUCI70
gma-u.5	100792761	probable hexosyltransferase MUCI70
gma-u.5	100783387	probable hexosyltransferase MUCI70
gma-u.5	100779951	probable hexosyltransferase MUCI70
mtr-u.5	11441256	probable hexosyltransferase MUCI70
mtr-u.5	11413571	probable hexosyltransferase MUCI70
mtr-u.5	25493158	probable hexosyltransferase MUCI70
ath-u.5	AT1G28240	strawberry notch protein (DUF616)
ath-u.5	AT1G53040	tRNA (met) cytidine acetyltransferase, putative (DUF616)
bra-r.6	103871160	uncharacterized LOC103871160
bra-r.6	103865296	uncharacterized LOC103865296
bra-r.6	103838975	uncharacterized LOC103838975
vvi-u.5	100246918	probable hexosyltransferase MUCI70
vvi-u.5	100256311	probable hexosyltransferase MUCI70
ghi-r.1	107895272	probable hexosyltransferase MUCI70
ghi-r.1	107891783	probable hexosyltransferase MUCI70
ghi-r.1	107889005	probable hexosyltransferase MUCI70
bna-r.1	106403054	probable hexosyltransferase MUCI70
bna-r.1	106382172	probable hexosyltransferase MUCI70
bna-r.1	106345911	probable hexosyltransferase MUCI70
cit-r.1	102625940	probable hexosyltransferase MUCI70
cit-r.1	102625961	probable hexosyltransferase MUCI70
sly-u.5	101250652	probable hexosyltransferase MUCI70
sly-u.5	101259611	probable hexosyltransferase MUCI70
sot-r.1	102601452	uncharacterized LOC102601452
sot-r.1	102582809	uncharacterized LOC102582809
sot-r.1	102589017	uncharacterized LOC102589017
nta-r.1	107771955	putative hexosyltransferase MUCI70
nta-r.1	107773981	putative hexosyltransferase MUCI70
nta-r.1	107779213	putative hexosyltransferase MUCI70
osa-u.5	4339416	probable hexosyltransferase MUCI70
osa-u.5	4323906	probable hexosyltransferase MUCI70
zma-u.5	103635853	Inner membrane protein oxaA
zma-u.5	103635859	Inner membrane protein oxaA
tae-r.2	123063411	probable hexosyltransferase MUCI70
tae-r.2	123182754	probable hexosyltransferase MUCI70
tae-r.2	123182657	probable hexosyltransferase MUCI70
hvu-r.1	123448670	probable hexosyltransferase MUCI70
hvu-r.1	123447017	probable hexosyltransferase MUCI70
sbi-r.1	8067528	uncharacterized LOC8067528
sbi-r.1	8085901	uncharacterized LOC8085901
bdi-r.1	100838689	uncharacterized LOC100838689
bdi-r.1	100826851	uncharacterized LOC100826851

Top 50 coexpressed genes to 7477403 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7477403 (ppo-u.5 coexpression data)

CoexMap"7477403"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_052308361.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, nucl 2, cyto 2, cyto_nucl 2

(predict for XP_052308361.1)

Subcellular
localization
TargetP

other 6, mito 5

(predict for XP_052308361.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7477403	ppo-r.4 for 7477403	ppo-m.4 for 7477403	ppo-u.5 for 7462332	ppo-u.5 for 18095581	ppo-u.5 for 18103028	gma-u.5 for 100792761	gma-u.5 for 100783387	gma-u.5 for 100779951	mtr-u.5 for 11441256	mtr-u.5 for 11413571	mtr-u.5 for 25493158	ath-u.5 for AT1G28240	ath-u.5 for AT1G53040	bra-r.6 for 103871160	bra-r.6 for 103865296	bra-r.6 for 103838975	vvi-u.5 for 100246918	vvi-u.5 for 100256311	ghi-r.1 for 107895272	ghi-r.1 for 107891783	ghi-r.1 for 107889005	bna-r.1 for 106403054	bna-r.1 for 106382172	bna-r.1 for 106345911	cit-r.1 for 102625940	cit-r.1 for 102625961	sly-u.5 for 101250652	sly-u.5 for 101259611	sot-r.1 for 102601452	sot-r.1 for 102582809	sot-r.1 for 102589017	nta-r.1 for 107771955	nta-r.1 for 107773981	nta-r.1 for 107779213	osa-u.5 for 4339416	osa-u.5 for 4323906	zma-u.5 for 103635853	zma-u.5 for 103635859	tae-r.2 for 123063411	tae-r.2 for 123182754	tae-r.2 for 123182657	hvu-r.1 for 123448670	hvu-r.1 for 123447017	sbi-r.1 for 8067528	sbi-r.1 for 8085901	bdi-r.1 for 100838689	bdi-r.1 for 100826851

Ortholog

Ortholog ID: 1406

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

probable hexosyltransferase MUCI70

strawberry notch protein (DUF616)

tRNA (met) cytidine acetyltransferase, putative (DUF616)

uncharacterized LOC103871160

uncharacterized LOC103832699

uncharacterized LOC103829026

probable hexosyltransferase MUCI70

uncharacterized LOC102582809

uncharacterized LOC102589017

uncharacterized LOC102590306

putative hexosyltransferase MUCI70

probable hexosyltransferase MUCI70

uncharacterized LOC103630624

uncharacterized LOC100382081

probable hexosyltransferase MUCI70

uncharacterized LOC8067528

uncharacterized LOC8085901

uncharacterized LOC100838689

uncharacterized LOC100826851

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	2
gma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	2
gma04144	Endocytosis	2
gma05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	2
gma03083	Polycomb repressive complex	2
gma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	4
mtr04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00520	Amino sugar and nucleotide sugar metabolism	2
ath03015	mRNA surveillance pathway	2
ath00230	Purine metabolism	2
ath00240	Pyrimidine metabolism	2
ath01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	5
bra01230	Biosynthesis of amino acids	4
bra00260	Glycine, serine and threonine metabolism	3
bra01240	Biosynthesis of cofactors	3
bra00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04148	Efferocytosis	3
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00541	Biosynthesis of various nucleotide sugars	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04142	Lysosome	2
sot04144	Endocytosis	2
sot05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04145	Phagosome	2
nta04148	Efferocytosis	2
nta04517	IgSF CAM signaling	2
nta04518	Integrin signaling	2
nta04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00240	Pyrimidine metabolism	3
osa01232	Nucleotide metabolism	3
osa01250	Biosynthesis of nucleotide sugars	2
osa01240	Biosynthesis of cofactors	2
osa00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00240	Pyrimidine metabolism	3
osa01232	Nucleotide metabolism	3
osa04144	Endocytosis	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	3
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00513	Various types of N-glycan biosynthesis	3
zma00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01250	Biosynthesis of nucleotide sugars	4
tae00190	Oxidative phosphorylation	3
tae00020	Citrate cycle (TCA cycle)	3
tae00270	Cysteine and methionine metabolism	3
tae00566	Sulfoquinovose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01250	Biosynthesis of nucleotide sugars	3
tae00010	Glycolysis / Gluconeogenesis	3
tae00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	2
hvu01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2
hvu00520	Amino sugar and nucleotide sugar metabolism	2
hvu01250	Biosynthesis of nucleotide sugars	2

Expression

Expression pattern

Entrez Gene ID^*

7477403

7462332

18095581

100783387

100810247

100804922

11441256

11413571

25493158

839718

841738

103871160

103832699

103829026

100246918

100256311

107895352

107916591

121230895

106382172

106358054

106376751

102625940

102625961

101259611

101247562

102582809

102589017

102590306

107771955

107773981

107820391

4339416

4323906

103630624

100382081

123182657

123140418

123064611

123448670

123447017

8067528

8085901

100838689

100826851

The preparation time of this page was 0.2 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	6	3	3	2	3	2	3	3	2	2	3	3	2	2	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7477403 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7477403 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**