ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7480452	G2/mitotic-specific cyclin-2
ppo-r.4	7480452	G2/mitotic-specific cyclin-2
ppo-u.5	7494697	cyclin-B2-4
ppo-u.5	7474574	cyclin-B2-4
ppo-u.5	7474902	G2/mitotic-specific cyclin-2
gma-u.5	100779889	G2/mitotic-specific cyclin-1
gma-u.5	100819848	G2/mitotic-specific cyclin-2
gma-u.5	100798068	G2/mitotic-specific cyclin-1-like
mtr-u.5	11405453	G2/mitotic-specific cyclin-1
mtr-u.5	11441109	G2/mitotic-specific cyclin-2
ath-u.5	CYCB2;3	Cyclin B2;3
ath-u.5	CYCB2;1	Cyclin B2;1
ath-u.5	CYCB2;2	Cyclin B2;2
bra-r.6	103835789	cyclin-B2-3
bra-r.6	103832088	cyclin-B2-4
vvi-u.5	100267672	G2/mitotic-specific cyclin-2
vvi-u.5	100262390	G2/mitotic-specific cyclin-2
ghi-r.1	107922605	G2/mitotic-specific cyclin-2
ghi-r.1	107937838	G2/mitotic-specific cyclin-2
ghi-r.1	107943725	G2/mitotic-specific cyclin-2
bna-r.1	106421538	cyclin-B2-4
bna-r.1	125583746	cyclin-B2-1-like
bna-r.1	106347266	cyclin-B2-3
cit-r.1	102618170	G2/mitotic-specific cyclin-2
cit-r.1	102615702	cyclin-B2-4
cit-r.1	102627493	G2/mitotic-specific cyclin-2-like
sly-u.5	101248088	G2/mitotic-specific cyclin-2-like
sly-u.5	101258748	G2/mitotic-specific cyclin-2
sly-u.5	101265619	G2/mitotic-specific cyclin-2-like
sot-r.1	102597602	G2/mitotic-specific cyclin-2-like
sot-r.1	102591724	G2/mitotic-specific cyclin-2
nta-r.1	107767057	G2/mitotic-specific cyclin-1-like
nta-r.1	107776502	G2/mitotic-specific cyclin-2-like
nta-r.1	107761487	G2/mitotic-specific cyclin-2
osa-u.5	4336670	cyclin-B2-1-like
osa-u.5	4342121	cyclin-B2-2-like
zma-u.5	542305	cyclin 3
zma-u.5	100272768	cyclin superfamily protein, putative
zma-u.5	100282653	cyclin B2
tae-r.2	123190060	cyclin-B2-1
tae-r.2	123167518	cyclin-B2-2
tae-r.2	123054171	cyclin-B2-1
hvu-r.1	123409189	cyclin-B2-2-like
hvu-r.1	123427502	cyclin-B2-1-like
sbi-r.1	8069227	cyclin-B2-2
sbi-r.1	8057580	cyclin-B2-1
bdi-r.1	100824456	cyclin-B2-1
bdi-r.1	100840708	cyclin-B2-2
cre-r.1	CHLRE_08g370401v5	uncharacterized protein

Top 50 coexpressed genes to 7480452 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7480452 (ppo-u.5 coexpression data)

CoexMap"7480452"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0044772 [list] [network] mitotic cell cycle phase transition	(50 genes)	IEA
GO:0000079 [list] [network] regulation of cyclin-dependent protein serine/threonine kinase activity	(64 genes)	IEA

GO CC

GO:0005813 [list] [network] centrosome	(39 genes)	IEA
GO:0000307 [list] [network] cyclin-dependent protein kinase holoenzyme complex	(90 genes)	IEA
GO:0005634 [list] [network] nucleus	(3662 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(6111 genes)	IEA

GO MF

GO:0016538 [list] [network] cyclin-dependent protein serine/threonine kinase regulator activity

(64 genes)

IEA

Protein

XP_024456907.1 [sequence] [blastp]
XP_052308747.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 8, pero 1	(predict for XP_024456907.1)
cyto 8, pero 1	(predict for XP_052308747.1)

Subcellular
localization
TargetP

other 8	(predict for XP_024456907.1)
other 7, chlo 3	(predict for XP_052308747.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7480452	ppo-r.4 for 7480452	ppo-u.5 for 7494697	ppo-u.5 for 7474574	ppo-u.5 for 7474902	gma-u.5 for 100779889	gma-u.5 for 100819848	gma-u.5 for 100798068	mtr-u.5 for 11405453	mtr-u.5 for 11441109	ath-u.5 for CYCB2;3	ath-u.5 for CYCB2;1	ath-u.5 for CYCB2;2	bra-r.6 for 103835789	bra-r.6 for 103832088	vvi-u.5 for 100267672	vvi-u.5 for 100262390	ghi-r.1 for 107922605	ghi-r.1 for 107937838	ghi-r.1 for 107943725	bna-r.1 for 106421538	bna-r.1 for 125583746	bna-r.1 for 106347266	cit-r.1 for 102618170	cit-r.1 for 102615702	cit-r.1 for 102627493	sly-u.5 for 101248088	sly-u.5 for 101258748	sly-u.5 for 101265619	sot-r.1 for 102597602	sot-r.1 for 102591724	nta-r.1 for 107767057	nta-r.1 for 107776502	nta-r.1 for 107761487	osa-u.5 for 4336670	osa-u.5 for 4342121	zma-u.5 for 542305	zma-u.5 for 100272768	zma-u.5 for 100282653	tae-r.2 for 123190060	tae-r.2 for 123167518	tae-r.2 for 123054171	hvu-r.1 for 123409189	hvu-r.1 for 123427502	sbi-r.1 for 8069227	sbi-r.1 for 8057580	bdi-r.1 for 100824456	bdi-r.1 for 100840708	cre-r.1 for CHLRE_08g370401v5

Ortholog

Ortholog ID: 1296

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

CYCB2;1

CYCB2;2

CYCB2;4

CycB2

Function^*

G2/mitotic-specific cyclin-2

cyclin-B2-4

G2/mitotic-specific cyclin-1

G2/mitotic-specific cyclin-2

G2/mitotic-specific cyclin-1-like

G2/mitotic-specific cyclin-1

G2/mitotic-specific cyclin-2

Cyclin B2;1

Cyclin B2;2

CYCLIN B2;4

cyclin-B2-4

cyclin-B2-3

cyclin-B2-1

G2/mitotic-specific cyclin-2

cyclin-B2-3

cyclin-B2-3-like

G2/mitotic-specific cyclin-2

cyclin-B2-4

G2/mitotic-specific cyclin-2-like

cyclin B2

G2/mitotic-specific cyclin-2-like

G2/mitotic-specific cyclin-2

G2/mitotic-specific cyclin-1-like

G2/mitotic-specific cyclin-2

cyclin-B2-3-like

cyclin-B2-1-like

cyclin-B2-2-like

cyclin 3

cyclin superfamily protein, putative

cyclin B2

cyclin-B2-1

cyclin-B2-2

cyclin-B2-1

cyclin-B2-2-like

cyclin-B2-1-like

cyclin-B2-2

cyclin-B2-1

cyclin-B2-2

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04814	Motor proteins	3
ppo04145	Phagosome	2
ppo04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2
mtr04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	2
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	2
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04814	Motor proteins	3
vvi04145	Phagosome	2
vvi04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	2
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	3

Expression

Expression pattern

Entrez Gene ID^*

7480452

7494697

7474574

100779889

100819848

100798068

11405453

11441109

816269

829714

843964

103832088

103872848

103874112

100267672

100262390

107937838

107943725

107922258

106347266

106440737

102618170

102615702

102627493

101248088

101265619

543747

102597602

102591724

107767057

107761487

107817354

4336670

4342121

542305

100272768

100282653

123190060

123167518

123054171

123409189

123427502

8069227

8057580

100824456

100840708

5726836

The preparation time of this page was 0.2 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	3	2	3	2	2	3	3	3	3	2	3	2	3	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7480452 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7480452 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**