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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7484452   protein EARLY FLOWERING 5 
 ppo-r.4   7484452   protein EARLY FLOWERING 5 
 ppo-m.4   7484452   protein EARLY FLOWERING 5 
 ppo-u.5   7454684   protein EARLY FLOWERING 5 
 gma-u.5   100792892   protein EARLY FLOWERING 5 
 mtr-u.5   25493796   protein EARLY FLOWERING 5 
 mtr-u.5   25493797   protein EARLY FLOWERING 5 
 ath-u.5   ELF5   proline-rich family protein 
 bra-r.6   103874703   protein EARLY FLOWERING 5 
 vvi-u.5   100251842   protein EARLY FLOWERING 5 
 ghi-r.1   107953510   protein EARLY FLOWERING 5 
 ghi-r.1   107926692   protein EARLY FLOWERING 5 
 bna-r.1   106424897   protein EARLY FLOWERING 5 
 bna-r.1   106347842   protein EARLY FLOWERING 5 
 cit-r.1   102626984   protein EARLY FLOWERING 5 
 sly-u.5   101248017   protein EARLY FLOWERING 5 
 sot-r.1   102592703   formin-like protein 5 
 nta-r.1   107777311   protein EARLY FLOWERING 5 
 nta-r.1   107806205   protein EARLY FLOWERING 5 
 osa-u.5   4342632   protein EARLY FLOWERING 5 
 zma-u.5   100192510   proline-rich family protein 
 zma-u.5   103632088   protein EARLY FLOWERING 5 
 tae-r.2   123052763   protein EARLY FLOWERING 5 
 tae-r.2   123044848   protein EARLY FLOWERING 5 
 tae-r.2   123188648   protein EARLY FLOWERING 5 
 hvu-r.1   123426149   protein EARLY FLOWERING 5 
 sbi-r.1   8063669   basic proline-rich protein 
 bdi-r.1   100844606   WW domain-binding protein 11 
 cre-r.1   CHLRE_07g348700v5   uncharacterized protein 

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Top 50 coexpressed genes to 7484452 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7484452 (ppo-u.5 coexpression data)

CoexMap"7484452"


ppoLOC7484452 | Entrez gene ID : 7484452    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 1 1 1 2 2 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045292 [list] [network] mRNA cis splicing, via spliceosome  (32 genes)  IEA  
GO CC
GO:0005681 [list] [network] spliceosomal complex  (181 genes)  IEA  
GO MF
Protein XP_002318698.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_002318698.2)
Subcellular
localization
TargetP
other 9  (predict for XP_002318698.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7484452
ppo-r.4
for
7484452
ppo-m.4
for
7484452
ppo-u.5
for
7454684
gma-u.5
for
100792892
mtr-u.5
for
25493796
mtr-u.5
for
25493797
ath-u.5
for
ELF5
bra-r.6
for
103874703
vvi-u.5
for
100251842
ghi-r.1
for
107953510
ghi-r.1
for
107926692
bna-r.1
for
106424897
bna-r.1
for
106347842
cit-r.1
for
102626984
sly-u.5
for
101248017
sot-r.1
for
102592703
nta-r.1
for
107777311
nta-r.1
for
107806205
osa-u.5
for
4342632
zma-u.5
for
100192510
zma-u.5
for
103632088
tae-r.2
for
123052763
tae-r.2
for
123044848
tae-r.2
for
123188648
hvu-r.1
for
123426149
sbi-r.1
for
8063669
bdi-r.1
for
100844606
cre-r.1
for
CHLRE_07g348700v5


Ortholog ID: 9188
Species ppo ppo gma mtr mtr ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC7484452 LOC7454684 LOC100792892 LOC25493796 LOC25493797 ELF5 LOC103874703 LOC100251842 LOC107953510 LOC107926692 LOC106424897 LOC106347842 LOC102626984 LOC101248017 LOC102592703 LOC107777311 LOC107806205 LOC4342632 LOC100192510 LOC103632088 LOC123052763 LOC123044848 LOC123188648 LOC123426149 LOC8063669 LOC100844606 CHLRE_07g348700v5
Function* protein EARLY FLOWERING 5 protein EARLY FLOWERING 5 protein EARLY FLOWERING 5 protein EARLY FLOWERING 5 protein EARLY FLOWERING 5 proline-rich family protein protein EARLY FLOWERING 5 protein EARLY FLOWERING 5 protein EARLY FLOWERING 5 protein EARLY FLOWERING 5 protein EARLY FLOWERING 5 protein EARLY FLOWERING 5 protein EARLY FLOWERING 5 protein EARLY FLOWERING 5 formin-like protein 5 protein EARLY FLOWERING 5 protein EARLY FLOWERING 5 protein EARLY FLOWERING 5 proline-rich family protein protein EARLY FLOWERING 5 protein EARLY FLOWERING 5 protein EARLY FLOWERING 5 protein EARLY FLOWERING 5 protein EARLY FLOWERING 5 basic proline-rich protein WW domain-binding protein 11 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 Nucleocytoplasmic transport 2
ath04144 Endocytosis 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03083 Polycomb repressive complex 2
nta03022 Basal transcription factors 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 3
nta03018 RNA degradation 2
nta03040 Spliceosome 2
nta03083 Polycomb repressive complex 2
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae03040 Spliceosome 2
tae04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
tae03460 Fanconi anemia pathway 3
tae04141 Protein processing in endoplasmic reticulum 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
cre03013 Nucleocytoplasmic transport 2
cre03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7484452 7454684 100792892 25493796 25493797 836385 103874703 100251842 107953510 107926692 106424897 106347842 102626984 101248017 102592703 107777311 107806205 4342632 100192510 103632088 123052763 123044848 123188648 123426149 8063669 100844606 5718046
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