ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7485447	uncharacterized LOC7485447
ppo-r.4	7485447	uncharacterized LOC7485447
ppo-m.4	7485447	uncharacterized LOC7485447
ppo-u.5	7478848	uncharacterized LOC7478848
ppo-u.5	112328798	uncharacterized LOC112328798
gma-u.5	100809053	epoxide hydrolase 2-like
gma-u.5	100811159	bifunctional epoxide hydrolase 2
mtr-u.5	120579693	bifunctional epoxide hydrolase 2
mtr-u.5	11431303	epoxide hydrolase A
ath-u.5	AT4G15955	alpha/beta-Hydrolases superfamily protein
ath-u.5	AT4G02340	alpha/beta-Hydrolases superfamily protein
ath-u.5	AT4G15960	alpha/beta-Hydrolases superfamily protein
bra-r.6	103836756	epoxide hydrolase A
bra-r.6	103841021	epoxide hydrolase A
bra-r.6	103860684	epoxide hydrolase A
vvi-u.5	100263668	uncharacterized LOC100263668
vvi-u.5	109121414	uncharacterized LOC109121414
ghi-r.1	107898944	bifunctional epoxide hydrolase 2
ghi-r.1	107898948	bifunctional epoxide hydrolase 2
ghi-r.1	107911064	epoxide hydrolase A
bna-r.1	125577659	epoxide hydrolase A-like
bna-r.1	125609128	epoxide hydrolase A-like
cit-r.1	102606629	uncharacterized LOC102606629
cit-r.1	102623480	uncharacterized LOC102623480
cit-r.1	102621604	uncharacterized LOC102621604
sly-u.5	101260173	uncharacterized LOC101260173
sly-u.5	101259675	uncharacterized LOC101259675
sly-u.5	101259572	uncharacterized LOC101259572
sot-r.1	102602367	bifunctional epoxide hydrolase 2-like
sot-r.1	102604339	bifunctional epoxide hydrolase 2-like
sot-r.1	102598609	bifunctional epoxide hydrolase 2-like
nta-r.1	107806029	epoxide hydrolase 2-like
nta-r.1	107811262	epoxide hydrolase 2
nta-r.1	107803580	epoxide hydrolase 2
osa-u.5	4327714	uncharacterized LOC4327714
osa-u.5	4334657	uncharacterized LOC4334657
osa-u.5	4352891	uncharacterized LOC4352891
zma-u.5	100281378	uncharacterized LOC100281378
zma-u.5	100383654	soluble epoxide hydrolase
zma-u.5	100283845	epoxide hydrolase 2
tae-r.2	123069562	epoxide hydrolase A
hvu-r.1	123453156	epoxide hydrolase A-like
hvu-r.1	123443401	epoxide hydrolase A-like
hvu-r.1	123432879	AB hydrolase superfamily protein YfhM-like
sbi-r.1	8080204	epoxide hydrolase A
sbi-r.1	8064068	epoxide hydrolase A
sbi-r.1	8065801	epoxide hydrolase B
bdi-r.1	100820894	epoxide hydrolase A
bdi-r.1	100823523	epoxide hydrolase A
bdi-r.1	100828936	epoxide hydrolase A
cre-r.1	CHLRE_01g010550v5	uncharacterized protein
cre-r.1	CHLRE_12g540550v5	uncharacterized protein

Top 50 coexpressed genes to 7485447 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7485447 (ppo-u.5 coexpression data)

CoexMap"7485447"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0016787 [list] [network] hydrolase activity

(3270 genes)

IEA

Protein

XP_002317224.2 [sequence] [blastp]
XP_024467445.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9	(predict for XP_002317224.2)
chlo 7, cyto 2	(predict for XP_024467445.1)

Subcellular
localization
TargetP

other 5	(predict for XP_002317224.2)
other 5	(predict for XP_024467445.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7485447	ppo-r.4 for 7485447	ppo-m.4 for 7485447	ppo-u.5 for 7478848	ppo-u.5 for 112328798	gma-u.5 for 100809053	gma-u.5 for 100811159	mtr-u.5 for 120579693	mtr-u.5 for 11431303	ath-u.5 for AT4G15955	ath-u.5 for AT4G02340	ath-u.5 for AT4G15960	bra-r.6 for 103836756	bra-r.6 for 103841021	bra-r.6 for 103860684	vvi-u.5 for 100263668	vvi-u.5 for 109121414	ghi-r.1 for 107898944	ghi-r.1 for 107898948	ghi-r.1 for 107911064	bna-r.1 for 125577659	bna-r.1 for 125609128	cit-r.1 for 102606629	cit-r.1 for 102623480	cit-r.1 for 102621604	sly-u.5 for 101260173	sly-u.5 for 101259675	sly-u.5 for 101259572	sot-r.1 for 102602367	sot-r.1 for 102604339	sot-r.1 for 102598609	nta-r.1 for 107806029	nta-r.1 for 107811262	nta-r.1 for 107803580	osa-u.5 for 4327714	osa-u.5 for 4334657	osa-u.5 for 4352891	zma-u.5 for 100281378	zma-u.5 for 100383654	zma-u.5 for 100283845	tae-r.2 for 123069562	hvu-r.1 for 123453156	hvu-r.1 for 123443401	hvu-r.1 for 123432879	sbi-r.1 for 8080204	sbi-r.1 for 8064068	sbi-r.1 for 8065801	bdi-r.1 for 100820894	bdi-r.1 for 100823523	bdi-r.1 for 100828936	cre-r.1 for CHLRE_01g010550v5	cre-r.1 for CHLRE_12g540550v5

Ortholog

Ortholog ID: 90

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

SEH

Function^*

uncharacterized LOC7485447

uncharacterized LOC7478848

uncharacterized LOC7494414

epoxide hydrolase 2-like

uncharacterized LOC106798342

epoxide hydrolase 2-like

epoxide hydrolase A

bifunctional epoxide hydrolase 2

alpha/beta-Hydrolases superfamily protein

soluble epoxide hydrolase

epoxide hydrolase A

uncharacterized LOC100246529

uncharacterized LOC100246611

uncharacterized LOC100259848

epoxide hydrolase A

epoxide hydrolase A-like

uncharacterized LOC102606629

uncharacterized LOC102630999

uncharacterized LOC102612779

uncharacterized LOC101259572

uncharacterized LOC101259283

uncharacterized LOC101263888

epoxide hydrolase

bifunctional epoxide hydrolase 2-like

epoxide hydrolase 2

bifunctional epoxide hydrolase 2-like

epoxide hydrolase 2-like

uncharacterized LOC4327714

uncharacterized LOC9267999

uncharacterized LOC100281378

uncharacterized LOC100192768

epoxide hydrolase A

epoxide hydrolase A-like

epoxide hydrolase A

bifunctional epoxide hydrolase 2-like

epoxide hydrolase A-like

epoxide hydrolase B

epoxide hydrolase A-like

AB hydrolase superfamily protein YfhM

epoxide hydrolase A

uncharacterized LOC112271640

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	4
ppo00670	One carbon pool by folate	3
ppo01240	Biosynthesis of cofactors	3
ppo00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	5
ppo01230	Biosynthesis of amino acids	4
ppo00710	Carbon fixation by Calvin cycle	3
ppo00260	Glycine, serine and threonine metabolism	2
ppo00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00941	Flavonoid biosynthesis	3
gma01210	2-Oxocarboxylic acid metabolism	3
gma01230	Biosynthesis of amino acids	3
gma00620	Pyruvate metabolism	2
gma00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	3
gma00280	Valine, leucine and isoleucine degradation	2
gma00030	Pentose phosphate pathway	2
gma00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00240	Pyrimidine metabolism	2
mtr00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01230	Biosynthesis of amino acids	2
mtr00240	Pyrimidine metabolism	2
mtr00760	Nicotinate and nicotinamide metabolism	2
mtr01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00330	Arginine and proline metabolism	2
mtr00360	Phenylalanine metabolism	2
mtr00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00061	Fatty acid biosynthesis	2
ath01212	Fatty acid metabolism	2
ath00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	2
ath00860	Porphyrin metabolism	2
ath00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00051	Fructose and mannose metabolism	2
bra00630	Glyoxylate and dicarboxylate metabolism	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00280	Valine, leucine and isoleucine degradation	2
bra00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	4
vvi04016	MAPK signaling pathway - plant	3
vvi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	3
ghi00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01240	Biosynthesis of cofactors	2
cit00620	Pyruvate metabolism	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04146	Peroxisome	2
sot00062	Fatty acid elongation	2
sot01040	Biosynthesis of unsaturated fatty acids	2
sot01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	3
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00909	Sesquiterpenoid and triterpenoid biosynthesis	4
nta00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	3
nta00220	Arginine biosynthesis	2
nta00250	Alanine, aspartate and glutamate metabolism	2
nta00630	Glyoxylate and dicarboxylate metabolism	2
nta00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00900	Terpenoid backbone biosynthesis	2
zma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00630	Glyoxylate and dicarboxylate metabolism	3
zma01200	Carbon metabolism	3
zma00010	Glycolysis / Gluconeogenesis	2
zma00020	Citrate cycle (TCA cycle)	2
zma00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	3
tae00030	Pentose phosphate pathway	3
tae00052	Galactose metabolism	3
tae00230	Purine metabolism	3
tae00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00071	Fatty acid degradation	2
hvu00592	alpha-Linolenic acid metabolism	2
hvu01212	Fatty acid metabolism	2
hvu04075	Plant hormone signal transduction	2
hvu04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	3

Expression

Expression pattern

Entrez Gene ID^*

7485447

7478848

7494414

100812544

106798342

100790275

25499667

25499666

25487634

819726

817216

817215

103836756

103860815

103860820

100246529

100246611

100259848

107891475

107891471

107926277

106445840

106391082

106365515

102606629

102630999

102612779

101259572

101259283

101263888

102577455

102579759

102590723

107774212

107793668

107793674

4327714

9267999

100281378

100192768

111589236

123064591

123160349

123432863

123402130

8065801

110433542

8065806

100828936

112271640

66051972

5719489

The preparation time of this page was 0.4 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	2	2	3	3	2	3	2	3	3	3	3	3	3	1	3	3	3	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7485447 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7485447 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**