ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7485472	uncharacterized LOC7485472
ppo-r.4	7485472	uncharacterized LOC7485472
ppo-u.5	7475117	uncharacterized LOC7475117
ppo-u.5	7494931	uncharacterized LOC7494931
ppo-u.5	7464931	uncharacterized LOC7464931
gma-u.5	100813288	uncharacterized LOC100813288
gma-u.5	100812832	uncharacterized LOC100812832
gma-u.5	100806290	uncharacterized LOC100806290
mtr-u.5	25484919	uncharacterized LOC25484919
mtr-u.5	11441654	uncharacterized LOC11441654
ath-u.5	AT1G15350	DUF4050 family protein
ath-u.5	AT5G25360	uncharacterized protein
bra-r.6	103842908	uncharacterized LOC103842908
bra-r.6	103874397	uncharacterized LOC103874397
bra-r.6	103854758	uncharacterized LOC103854758
vvi-u.5	100854479	uncharacterized LOC100854479
vvi-u.5	100245670	uncharacterized LOC100245670
vvi-u.5	100250951	uncharacterized LOC100250951
ghi-r.1	107934552	uncharacterized LOC107934552
ghi-r.1	121206193	uncharacterized LOC121206193
bna-r.1	BNAA09G34710D	uncharacterized BNAA09G34710D
bna-r.1	BNAA06G27650D	uncharacterized BNAA06G27650D
bna-r.1	106382642	uncharacterized LOC106382642
cit-r.1	102606763	uncharacterized LOC102606763
cit-r.1	102615251	hypothetical protein
cit-r.1	102620837	hypothetical protein
sly-u.5	101248987	uncharacterized LOC101248987
sly-u.5	104644301	uncharacterized LOC104644301
sly-u.5	101261629	uncharacterized LOC101261629
sot-r.1	102596461	uncharacterized LOC102596461
sot-r.1	102578862	uncharacterized LOC102578862
nta-r.1	107819184	uncharacterized LOC107819184
nta-r.1	107763202	uncharacterized LOC107763202
nta-r.1	107785432	uncharacterized LOC107785432
osa-u.5	4343229	uncharacterized LOC4343229
osa-u.5	4328648	uncharacterized LOC4328648
osa-u.5	4327646	uncharacterized LOC4327646
zma-u.5	100216795	uncharacterized LOC100216795
zma-u.5	118476413	uncharacterized LOC118476413
zma-u.5	103633165	uncharacterized LOC103633165
tae-r.2	123157433	uncharacterized LOC123157433
tae-r.2	123060547	uncharacterized LOC123060547
tae-r.2	123069110	uncharacterized LOC123069110
hvu-r.1	123411192	uncharacterized LOC123411192
hvu-r.1	123443053	uncharacterized LOC123443053
hvu-r.1	123402253	uncharacterized LOC123402253
sbi-r.1	110430931	uncharacterized LOC110430931
sbi-r.1	8056548	uncharacterized LOC8056548
sbi-r.1	8082918	uncharacterized LOC8082918
bdi-r.1	100839071	uncharacterized LOC100839071
bdi-r.1	100828365	uncharacterized LOC100828365
bdi-r.1	100833399	uncharacterized LOC100833399
cre-r.1	CHLRE_11g482626v5	uncharacterized protein

Top 50 coexpressed genes to 7485472 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7485472 (ppo-u.5 coexpression data)

CoexMap"7485472"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002308983.2 [sequence] [blastp]

Subcellular
localization
wolf

extr 6, chlo 1, nucl 1, cyto 1, vacu 1, E.R. 1, cyto_nucl 1, E.R._vacu 1, cyto_E.R. 1

(predict for XP_002308983.2)

Subcellular
localization
TargetP

scret 4

(predict for XP_002308983.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7485472	ppo-r.4 for 7485472	ppo-u.5 for 7475117	ppo-u.5 for 7494931	ppo-u.5 for 7464931	gma-u.5 for 100813288	gma-u.5 for 100812832	gma-u.5 for 100806290	mtr-u.5 for 25484919	mtr-u.5 for 11441654	ath-u.5 for AT1G15350	ath-u.5 for AT5G25360	bra-r.6 for 103842908	bra-r.6 for 103874397	bra-r.6 for 103854758	vvi-u.5 for 100854479	vvi-u.5 for 100245670	vvi-u.5 for 100250951	ghi-r.1 for 107934552	ghi-r.1 for 121206193	bna-r.1 for BNAA09G34710D	bna-r.1 for BNAA06G27650D	bna-r.1 for 106382642	cit-r.1 for 102606763	cit-r.1 for 102615251	cit-r.1 for 102620837	sly-u.5 for 101248987	sly-u.5 for 104644301	sly-u.5 for 101261629	sot-r.1 for 102596461	sot-r.1 for 102578862	nta-r.1 for 107819184	nta-r.1 for 107763202	nta-r.1 for 107785432	osa-u.5 for 4343229	osa-u.5 for 4328648	osa-u.5 for 4327646	zma-u.5 for 100216795	zma-u.5 for 118476413	zma-u.5 for 103633165	tae-r.2 for 123157433	tae-r.2 for 123060547	tae-r.2 for 123069110	hvu-r.1 for 123411192	hvu-r.1 for 123443053	hvu-r.1 for 123402253	sbi-r.1 for 110430931	sbi-r.1 for 8056548	sbi-r.1 for 8082918	bdi-r.1 for 100839071	bdi-r.1 for 100828365	bdi-r.1 for 100833399	cre-r.1 for CHLRE_11g482626v5

Ortholog

Ortholog ID: 545

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC7485472

uncharacterized LOC7494931

uncharacterized LOC7470097

uncharacterized LOC100812832

uncharacterized LOC100796170

uncharacterized LOC25484919

uncharacterized LOC11436056

uncharacterized LOC11435981

zinc finger protein

uncharacterized protein

uncharacterized LOC103842908

uncharacterized LOC103874397

uncharacterized LOC103872326

uncharacterized LOC100250951

uncharacterized LOC100254371

uncharacterized LOC100854399

uncharacterized LOC107888413

uncharacterized LOC107907333

uncharacterized LOC107915799

uncharacterized BNAA09G34710D

uncharacterized LOC106382642

uncharacterized BNAC08G25670D

uncharacterized LOC102606763

hypothetical protein

uncharacterized LOC101261629

uncharacterized LOC101263220

uncharacterized LOC101253173

uncharacterized LOC102596461

uncharacterized LOC107058297

uncharacterized LOC107763202

uncharacterized LOC107797262

uncharacterized LOC107813636

uncharacterized LOC4343229

uncharacterized LOC4328648

uncharacterized LOC4327646

uncharacterized LOC118476413

uncharacterized LOC103633165

uncharacterized LOC100277310

uncharacterized LOC123060547

uncharacterized LOC123148184

uncharacterized LOC123168413

uncharacterized LOC123411192

uncharacterized LOC123443053

uncharacterized LOC123402253

uncharacterized LOC110430931

uncharacterized LOC8056548

uncharacterized LOC8080675

uncharacterized LOC100839071

uncharacterized LOC100833399

uncharacterized LOC100834614

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04130	SNARE interactions in vesicular transport	4
gma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2
ath04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00230	Purine metabolism	2
vvi01232	Nucleotide metabolism	2
vvi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2
vvi01250	Biosynthesis of nucleotide sugars	2
vvi04144	Endocytosis	2
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2
ghi00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00564	Glycerophospholipid metabolism	4
bna00052	Galactose metabolism	4
bna04517	IgSF CAM signaling	2
bna04814	Motor proteins	2
bna00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00052	Galactose metabolism	4
bna00564	Glycerophospholipid metabolism	2
bna04517	IgSF CAM signaling	2
bna04814	Motor proteins	2
bna00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	3
sly04136	Autophagy - other	2
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	7
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot01250	Biosynthesis of nucleotide sugars	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2
nta03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00600	Sphingolipid metabolism	2
zma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	4
zma04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	3
tae04136	Autophagy - other	3
tae04382	Cornified envelope formation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	3
tae04136	Autophagy - other	3
tae04382	Cornified envelope formation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

7485472

7494931

7470097

100812832

100796170

25484919

11436056

11435981

824653

820820

103842908

103874397

103872326

100250951

100254371

100854399

107888413

107907333

107915799

106411801

106382642

106402602

102606763

102615251

102620837

101261629

101263220

101253173

102596461

107058297

107763202

107797262

107813636

4343229

4328648

4327646

118476413

103633165

100277310

123060547

123148184

123168413

123411192

123443053

123402253

110430931

8056548

8080675

100839071

100833399

100834614

66055375

The preparation time of this page was 0.2 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	3	2	2	3	3	2	3	3	3	2	3	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7485472 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7485472 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**