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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7487355   transcription factor SCREAM2 
 ppo-r.4   7487355   transcription factor SCREAM2 
 ppo-m.4   7487355   transcription factor SCREAM2 
 ppo-u.5   7460428   transcription factor SCREAM2 
 ppo-u.5   7458829   uncharacterized LOC7458829 
 gma-u.5   100305696   uncharacterized LOC100305696 
 gma-u.5   100306253   uncharacterized LOC100306253 
 gma-u.5   100306300   uncharacterized LOC100306300 
 mtr-u.5   11442077   uncharacterized LOC11442077 
 mtr-u.5   11434084   uncharacterized LOC11434084 
 ath-u.5   AT2G40435   transcription factor SCREAM-like protein 
 ath-u.5   AT3G56220   transcription regulator 
 bra-r.6   103830041   uncharacterized LOC103830041 
 bra-r.6   103863111   uncharacterized LOC103863111 
 bra-r.6   103866502   transcription factor bHLH61 
 vvi-u.5   100245026   uncharacterized LOC100245026 
 vvi-u.5   100241403   uncharacterized LOC100241403 
 ghi-r.1   107893943   transcription factor SCREAM2 
 ghi-r.1   107893686   uncharacterized LOC107893686 
 ghi-r.1   107896810   transcription factor SCREAM2 
 bna-r.1   106367960   transcription factor bHLH93 
 bna-r.1   106356736   uncharacterized LOC106356736 
 cit-r.1   102616900   uncharacterized LOC102616900 
 sly-u.5   101268000   transcription factor bHLH61 
 sot-r.1   102600920   transcription factor bHLH61-like 
 sot-r.1   102583721   transcription factor SCREAM2-like 
 nta-r.1   107812080   uncharacterized LOC107812080 
 nta-r.1   107785356   transcription factor bHLH61-like 
 nta-r.1   107772985   transcription factor SCREAM2-like 
 osa-u.5   4332778   transcription factor SCREAM2 
 osa-u.5   4338459   transcription factor SCREAM2 
 osa-u.5   4349582   transcription factor bHLH61 
 zma-u.5   100274843   uncharacterized LOC100274843 
 sbi-r.1   8082324   uncharacterized LOC8082324 
 bdi-r.1   100836923   uncharacterized LOC100836923 

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Top 50 coexpressed genes to 7487355 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7487355 (ppo-u.5 coexpression data)

CoexMap"7487355"


ppoLOC7487355 | Entrez gene ID : 7487355    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma sbi bdi cre tae hvu
Paralog 5 3 2 2 3 2 3 2 1 1 2 3 3 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (847 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1363 genes)  IEA  
Protein XP_002309176.1 [sequence] [blastp]
XP_024459245.1 [sequence] [blastp]
XP_024459246.1 [sequence] [blastp]
XP_024459247.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  plas 1,  golg_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_002309176.1)
nucl 4,  cyto 2,  cysk_nucl 2,  plas 1  (predict for XP_024459245.1)
nucl 4,  plas 2,  golg_plas 1,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_024459246.1)
nucl 6,  cyto 1,  plas 1,  golg_plas 1  (predict for XP_024459247.1)
Subcellular
localization
TargetP
other 3  (predict for XP_002309176.1)
other 4  (predict for XP_024459245.1)
other 4  (predict for XP_024459246.1)
other 3  (predict for XP_024459247.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7487355
ppo-r.4
for
7487355
ppo-m.4
for
7487355
ppo-u.5
for
7460428
ppo-u.5
for
7458829
gma-u.5
for
100305696
gma-u.5
for
100306253
gma-u.5
for
100306300
mtr-u.5
for
11442077
mtr-u.5
for
11434084
ath-u.5
for
AT2G40435
ath-u.5
for
AT3G56220
bra-r.6
for
103830041
bra-r.6
for
103863111
bra-r.6
for
103866502
vvi-u.5
for
100245026
vvi-u.5
for
100241403
ghi-r.1
for
107893943
ghi-r.1
for
107893686
ghi-r.1
for
107896810
bna-r.1
for
106367960
bna-r.1
for
106356736
cit-r.1
for
102616900
sly-u.5
for
101268000
sot-r.1
for
102600920
sot-r.1
for
102583721
nta-r.1
for
107812080
nta-r.1
for
107785356
nta-r.1
for
107772985
osa-u.5
for
4332778
osa-u.5
for
4338459
osa-u.5
for
4349582
zma-u.5
for
100274843
sbi-r.1
for
8082324
bdi-r.1
for
100836923


Ortholog ID: 1143
Species ppo ppo ppo gma gma mtr mtr ath ath bra bra bra vvi vvi ghi ghi bna bna cit sly sot sot nta nta nta osa osa osa zma sbi bdi
Symbol LOC7487355 LOC7460428 LOC7458829 LOC100305696 LOC100814138 LOC11442077 LOC11434084 AT2G40435 AT3G56220 LOC103830041 LOC103863111 LOC103866502 LOC100245026 LOC100241403 LOC107906144 LOC107933782 LOC106356736 LOC106450698 LOC102616900 LOC101268000 LOC102600920 LOC102583721 LOC107785356 LOC107772985 LOC107819998 LOC4338459 LOC4349582 LOC4351296 LOC100274843 LOC8082324 LOC100836923
Function* transcription factor SCREAM2 transcription factor SCREAM2 uncharacterized LOC7458829 uncharacterized LOC100305696 uncharacterized LOC100814138 uncharacterized LOC11442077 uncharacterized LOC11434084 transcription factor SCREAM-like protein transcription regulator uncharacterized LOC103830041 uncharacterized LOC103863111 transcription factor bHLH61 uncharacterized LOC100245026 uncharacterized LOC100241403 transcription factor SCREAM2 uncharacterized LOC107933782 uncharacterized LOC106356736 transcription factor bHLH61 uncharacterized LOC102616900 transcription factor bHLH61 transcription factor bHLH61-like transcription factor SCREAM2-like transcription factor bHLH61-like transcription factor SCREAM2-like transcription factor bHLH93 transcription factor SCREAM2 transcription factor bHLH61 transcription factor SCREAM2 uncharacterized LOC100274843 uncharacterized LOC8082324 uncharacterized LOC100836923
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00562 Inositol phosphate metabolism 3
ppo00564 Glycerophospholipid metabolism 2
ppo00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 2
mtr04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00942 Anthocyanin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 2
ath04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 3
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 3
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00350 Tyrosine metabolism 3
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna00270 Cysteine and methionine metabolism 2
bna00360 Phenylalanine metabolism 2
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 8
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00564 Glycerophospholipid metabolism 2
zma00565 Ether lipid metabolism 2
zma00590 Arachidonic acid metabolism 2
zma00591 Linoleic acid metabolism 2
zma00592 alpha-Linolenic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7487355 7460428 7458829 100305696 100814138 11442077 11434084 818637 824788 103830041 103863111 103866502 100245026 100241403 107906144 107933782 106356736 106450698 102616900 101268000 102600920 102583721 107785356 107772985 107819998 4338459 4349582 4351296 100274843 8082324 100836923
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