ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7488382	uncharacterized LOC7488382
ppo-r.4	7488382	uncharacterized LOC7488382
ppo-m.4	7488382	uncharacterized LOC7488382
gma-u.5	100817656	uncharacterized LOC100817656
gma-u.5	100800265	uncharacterized LOC100800265
mtr-u.5	25485443	uncharacterized LOC25485443
ath-u.5	AT1G22970	cyclin-D1-binding protein
bra-r.6	103840807	uncharacterized LOC103840807
bra-r.6	103831643	uncharacterized LOC103831643
vvi-u.5	100243961	uncharacterized LOC100243961
ghi-r.1	107959987	uncharacterized LOC107959987
ghi-r.1	107903808	uncharacterized LOC107903808
bna-r.1	125590246	uncharacterized LOC125590246
bna-r.1	106429820	uncharacterized LOC106429820
bna-r.1	106416006	uncharacterized LOC106416006
cit-r.1	102620219	uncharacterized LOC102620219
sly-u.5	101263608	uncharacterized LOC101263608
sot-r.1	102598256	uncharacterized LOC102598256
nta-r.1	107777380	uncharacterized LOC107777380
nta-r.1	107784470	uncharacterized LOC107784470
osa-u.5	4339555	uncharacterized LOC4339555
zma-u.5	100194118	uncharacterized LOC100194118
tae-r.2	123066562	uncharacterized LOC123066562
tae-r.2	123067194	uncharacterized LOC123067194
tae-r.2	123123891	uncharacterized LOC123123891
hvu-r.1	123449632	uncharacterized LOC123449632
sbi-r.1	8063559	uncharacterized LOC8063559
bdi-r.1	100833175	uncharacterized LOC100833175

Annotation

functional annotation

KEGG

GO BP

GO:0051726 [list] [network] regulation of cell cycle

(120 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(3662 genes)

IEA

GO MF

Protein

XP_002312423.2 [sequence] [blastp]
XP_024461948.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 3, chlo 2, nucl 2, cyto 2, cyto_nucl 2	(predict for XP_002312423.2)
extr 3, nucl 2, cyto 2, cyto_nucl 2	(predict for XP_024461948.1)

Subcellular
localization
TargetP

other 8, mito 3	(predict for XP_002312423.2)
other 8, mito 4	(predict for XP_024461948.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7488382	ppo-r.4 for 7488382	ppo-m.4 for 7488382	gma-u.5 for 100817656	gma-u.5 for 100800265	mtr-u.5 for 25485443	ath-u.5 for AT1G22970	bra-r.6 for 103840807	bra-r.6 for 103831643	vvi-u.5 for 100243961	ghi-r.1 for 107959987	ghi-r.1 for 107903808	bna-r.1 for 125590246	bna-r.1 for 106429820	bna-r.1 for 106416006	cit-r.1 for 102620219	sly-u.5 for 101263608	sot-r.1 for 102598256	nta-r.1 for 107777380	nta-r.1 for 107784470	osa-u.5 for 4339555	zma-u.5 for 100194118	tae-r.2 for 123066562	tae-r.2 for 123067194	tae-r.2 for 123123891	hvu-r.1 for 123449632	sbi-r.1 for 8063559	bdi-r.1 for 100833175

Ortholog

Ortholog ID: 6711

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC7488382

uncharacterized LOC100817656

uncharacterized LOC100800265

uncharacterized LOC25485443

cyclin-D1-binding protein

uncharacterized LOC103840807

uncharacterized LOC103831643

uncharacterized LOC100243961

uncharacterized LOC107959987

uncharacterized LOC107903808

uncharacterized LOC106429820

uncharacterized LOC106416006

uncharacterized LOC102620219

uncharacterized LOC101263608

uncharacterized LOC102598256

uncharacterized LOC107777380

uncharacterized LOC107784470

uncharacterized LOC4339555

uncharacterized LOC100194118

uncharacterized LOC123067194

uncharacterized LOC123138048

uncharacterized LOC123144574

uncharacterized LOC123449632

uncharacterized LOC8063559

uncharacterized LOC100833175

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03020	RNA polymerase	4
ppo03420	Nucleotide excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00350	Tyrosine metabolism	2
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	5
bna03420	Nucleotide excision repair	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	4
bna03420	Nucleotide excision repair	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	2
sly03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	3
nta03013	Nucleocytoplasmic transport	2
nta03250	Viral life cycle - HIV-1	2
nta03030	DNA replication	2
nta03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03030	DNA replication	2
nta03410	Base excision repair	2
nta03420	Nucleotide excision repair	2
nta03430	Mismatch repair	2
nta03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	5
osa03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2
tae03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03420	Nucleotide excision repair	2
tae03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	4
hvu03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	3
bdi03020	RNA polymerase	2

Expression

Expression pattern

Entrez Gene ID^*

7488382

100817656

100800265

25485443

838904

103840807

103831643

100243961

107959987

107903808

106429820

106416006

102620219

101263608

102598256

107777380

107784470

4339555

100194118

123067194

123138048

123144574

123449632

8063559

100833175

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7488382 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7488382 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	1	1	2	1	2	3	1	1	1	2	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7488382 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7488382 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**