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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7489708   transcription factor CSA 
 ppo-r.4   7489708   transcription factor CSA 
 ppo-m.4   7489708   transcription factor CSA 
 gma-u.5   100776882   transcription factor MYB54 
 gma-u.5   100791795   transcription factor CSA 
 mtr-u.5   11435624   transcription factor MYB52 
 vvi-u.5   100245102   transcription factor CSA 
 ghi-r.1   107893129   transcriptional activator Myb-like 
 ghi-r.1   107891104   transcription factor MYB46-like 
 ghi-r.1   107937454   transcription factor MYB54 
 cit-r.1   127899393   transcription factor CSA-like 
 cit-r.1   102620458   transcription factor MYB52-like 
 sly-u.5   101259098   Myb-like DNA-binding family protein 
 sot-r.1   102601981   myb-related protein B 
 nta-r.1   107830792   transcription factor MYB56-like 
 nta-r.1   107809643   transcription factor MYB56 

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Top 50 coexpressed genes to 7489708 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7489708 (ppo-u.5 coexpression data)

CoexMap"7489708"


ppoLOC7489708 | Entrez gene ID : 7489708    
Species ppo gma mtr vvi ghi cit sly sot nta sbi cre ath bra tae zma osa bdi hvu bna
Paralog 3 2 1 1 3 2 1 1 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (266 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (338 genes)  IEA  
Protein XP_002319732.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002319732.2)
Subcellular
localization
TargetP
other 6  (predict for XP_002319732.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7489708
ppo-r.4
for
7489708
ppo-m.4
for
7489708
gma-u.5
for
100776882
gma-u.5
for
100791795
mtr-u.5
for
11435624
vvi-u.5
for
100245102
ghi-r.1
for
107893129
ghi-r.1
for
107891104
ghi-r.1
for
107937454
cit-r.1
for
127899393
cit-r.1
for
102620458
sly-u.5
for
101259098
sot-r.1
for
102601981
nta-r.1
for
107830792
nta-r.1
for
107809643


Ortholog ID: 12823
Species ppo gma gma mtr vvi ghi ghi ghi cit cit sly sot nta nta
Symbol LOC7489708 LOC100776882 LOC100791795 LOC11435624 LOC100245102 LOC107893129 LOC107962899 LOC121209445 LOC127899393 LOC102620458 LOC101259098 LOC102601981 LOC107830792 LOC107809643
Function* transcription factor CSA transcription factor MYB54 transcription factor CSA transcription factor MYB52 transcription factor CSA transcriptional activator Myb-like transcription factor MYB54 transcription factor MYB56 transcription factor CSA-like transcription factor MYB52-like Myb-like DNA-binding family protein myb-related protein B transcription factor MYB56-like transcription factor MYB56
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 14
ppo04016 MAPK signaling pathway - plant 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00250 Alanine, aspartate and glutamate metabolism 2
vvi00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 7
ghi03060 Protein export 3
ghi04145 Phagosome 3
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 3
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00460 Cyanoamino acid metabolism 5
cit00966 Glucosinolate biosynthesis 5
cit01210 2-Oxocarboxylic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00770 Pantothenate and CoA biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta03083 Polycomb repressive complex 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00770 Pantothenate and CoA biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta03083 Polycomb repressive complex 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7489708 100776882 100791795 11435624 100245102 107893129 107962899 121209445 127899393 102620458 101259098 102601981 107830792 107809643
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