ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7490199	uncharacterized LOC7490199
ppo-r.4	7490199	uncharacterized LOC7490199
ppo-m.4	7490199	uncharacterized LOC7490199
ppo-u.5	7479185	uncharacterized LOC7479185
gma-u.5	100809936	uncharacterized LOC100809936
gma-u.5	100790782	uncharacterized LOC100790782
mtr-u.5	25501879	uncharacterized LOC25501879
ath-u.5	AT5G65250	uncharacterized protein
bra-r.6	103873955	uncharacterized LOC103873955
bra-r.6	103855289	uncharacterized LOC103855289
vvi-u.5	100244969	uncharacterized LOC100244969
ghi-r.1	107951728	uncharacterized LOC107951728
bna-r.1	125588904	uncharacterized LOC125588904
bna-r.1	BNACNNG28270D	uncharacterized BNACNNG28270D
bna-r.1	106382879	uncharacterized LOC106382879
cit-r.1	102620591	uncharacterized LOC102620591
sly-u.5	101259600	uncharacterized LOC101259600
sot-r.1	102592816	uncharacterized LOC102592816
nta-r.1	107810358	uncharacterized LOC107810358
nta-r.1	107810591	uncharacterized LOC107810591
osa-u.5	4345875	uncharacterized LOC4345875
tae-r.2	123154130	uncharacterized LOC123154130
tae-r.2	123158425	uncharacterized LOC123158425
tae-r.2	123165527	uncharacterized LOC123165527
sbi-r.1	8067040	uncharacterized LOC8067040
bdi-r.1	100841857	uncharacterized LOC100841857

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009941 [list] [network] chloroplast envelope

(125 genes)

IEA

GO MF

Protein

XP_002309969.2 [sequence] [blastp]
XP_024460734.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, chlo_mito 4, mito 2, nucl 2, plas 1, golg 1, golg_plas 1	(predict for XP_002309969.2)
chlo 4, chlo_mito 4, mito 3, nucl 1, plas 1, golg 1, nucl_plas 1, golg_plas 1	(predict for XP_024460734.1)

Subcellular
localization
TargetP

chlo 8	(predict for XP_002309969.2)
chlo 8	(predict for XP_024460734.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7490199	ppo-r.4 for 7490199	ppo-m.4 for 7490199	ppo-u.5 for 7479185	gma-u.5 for 100809936	gma-u.5 for 100790782	mtr-u.5 for 25501879	ath-u.5 for AT5G65250	bra-r.6 for 103873955	bra-r.6 for 103855289	vvi-u.5 for 100244969	ghi-r.1 for 107951728	bna-r.1 for 125588904	bna-r.1 for BNACNNG28270D	bna-r.1 for 106382879	cit-r.1 for 102620591	sly-u.5 for 101259600	sot-r.1 for 102592816	nta-r.1 for 107810358	nta-r.1 for 107810591	osa-u.5 for 4345875	tae-r.2 for 123154130	tae-r.2 for 123158425	tae-r.2 for 123165527	sbi-r.1 for 8067040	bdi-r.1 for 100841857

Ortholog

Ortholog ID: 8667

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

tae

sbi

bdi

Symbol

Function^*

uncharacterized LOC7490199

uncharacterized LOC7479185

uncharacterized LOC100809936

uncharacterized LOC100790782

uncharacterized LOC25501879

uncharacterized protein

uncharacterized LOC103873955

uncharacterized LOC103855289

uncharacterized LOC100244969

uncharacterized LOC107951728

uncharacterized LOC125588904

uncharacterized BNACNNG28270D

uncharacterized LOC106382879

uncharacterized LOC102620591

uncharacterized LOC101259600

uncharacterized LOC102592816

uncharacterized LOC107810358

uncharacterized LOC107810591

uncharacterized LOC4345875

uncharacterized LOC123154130

uncharacterized LOC123158425

uncharacterized LOC123165527

uncharacterized LOC8067040

uncharacterized LOC100841857

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	3
ppo00620	Pyruvate metabolism	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	3
ppo00785	Lipoic acid metabolism	2
ppo00230	Purine metabolism	2
ppo01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	5
gma00620	Pyruvate metabolism	4
gma00010	Glycolysis / Gluconeogenesis	3
gma00785	Lipoic acid metabolism	3
gma00061	Fatty acid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	5
mtr00020	Citrate cycle (TCA cycle)	2
mtr01200	Carbon metabolism	2
mtr04141	Protein processing in endoplasmic reticulum	2
mtr00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	2
bra04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00260	Glycine, serine and threonine metabolism	2
bra00261	Monobactam biosynthesis	2
bra00270	Cysteine and methionine metabolism	2
bra00300	Lysine biosynthesis	2
bra01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01240	Biosynthesis of cofactors	6
ghi00053	Ascorbate and aldarate metabolism	2
ghi04146	Peroxisome	2
ghi00740	Riboflavin metabolism	2
ghi00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00260	Glycine, serine and threonine metabolism	4
bna00261	Monobactam biosynthesis	4
bna00270	Cysteine and methionine metabolism	4
bna00300	Lysine biosynthesis	4
bna01210	2-Oxocarboxylic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00260	Glycine, serine and threonine metabolism	4
bna00261	Monobactam biosynthesis	4
bna00270	Cysteine and methionine metabolism	4
bna00300	Lysine biosynthesis	4
bna01210	2-Oxocarboxylic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00020	Citrate cycle (TCA cycle)	3
cit01200	Carbon metabolism	3
cit00220	Arginine biosynthesis	2
cit00640	Propanoate metabolism	2
cit01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01240	Biosynthesis of cofactors	4
sly00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00785	Lipoic acid metabolism	4
nta00564	Glycerophospholipid metabolism	2
nta00010	Glycolysis / Gluconeogenesis	2
nta00020	Citrate cycle (TCA cycle)	2
nta00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	2
nta00195	Photosynthesis	2
nta00564	Glycerophospholipid metabolism	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3
tae04141	Protein processing in endoplasmic reticulum	3
tae04144	Endocytosis	3
tae00970	Aminoacyl-tRNA biosynthesis	3

Expression

Expression pattern

Entrez Gene ID^*

7490199

7479185

100809936

100790782

25501879

836650

103873955

103855289

100244969

107951728

125588904

106426936

106382879

102620591

101259600

102592816

107810358

107810591

4345875

123154130

123158425

123165527

8067040

100841857

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7490199 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7490199 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	tae	sbi	bdi	zma	cre	hvu
Paralog	4	2	1	1	2	1	1	3	1	1	1	2	1	3	1	1	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7490199 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7490199 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**