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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7493976   putative E3 ubiquitin-protein ligase LIN-1 
 ppo-r.4   7493976   putative E3 ubiquitin-protein ligase LIN-1 
 gma-u.5   100776142   putative E3 ubiquitin-protein ligase LIN-1 
 mtr-u.5   11418360   putative E3 ubiquitin-protein ligase LIN 
 vvi-u.5   100245471   putative E3 ubiquitin-protein ligase LIN-1 
 ghi-r.1   107957989   putative E3 ubiquitin-protein ligase LIN-1 
 ghi-r.1   121214050   putative E3 ubiquitin-protein ligase LIN-1 
 sly-u.5   101245353   putative E3 ubiquitin-protein ligase LIN-1 
 sot-r.1   102580538   putative E3 ubiquitin-protein ligase LIN-1 
 nta-r.1   107776283   putative E3 ubiquitin-protein ligase LIN-1 
 nta-r.1   107820791   putative E3 ubiquitin-protein ligase LIN-1 

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Top 50 coexpressed genes to 7493976 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7493976 (ppo-u.5 coexpression data)

CoexMap"7493976"


ppoLOC7493976 | Entrez gene ID : 7493976    
Species ppo gma mtr vvi ghi sly sot nta cre bra ath hvu bna tae bdi osa zma cit sbi
Paralog 2 1 1 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (417 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (401 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024458003.1 [sequence] [blastp]
XP_024458004.1 [sequence] [blastp]
XP_024458005.1 [sequence] [blastp]
XP_024458007.1 [sequence] [blastp]
XP_052309265.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  chlo 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_024458003.1)
nucl 3,  chlo 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_024458004.1)
nucl 3,  chlo 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_024458005.1)
nucl 3,  chlo 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_024458007.1)
nucl 3,  chlo 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_052309265.1)
Subcellular
localization
TargetP
other 7  (predict for XP_024458003.1)
other 7  (predict for XP_024458004.1)
other 7  (predict for XP_024458005.1)
other 7  (predict for XP_024458007.1)
other 7  (predict for XP_052309265.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7493976
ppo-r.4
for
7493976
gma-u.5
for
100776142
mtr-u.5
for
11418360
vvi-u.5
for
100245471
ghi-r.1
for
107957989
ghi-r.1
for
121214050
sly-u.5
for
101245353
sot-r.1
for
102580538
nta-r.1
for
107776283
nta-r.1
for
107820791


Ortholog ID: 14547
Species ppo gma mtr vvi ghi ghi sly sot nta nta
Symbol LOC7493976 LOC100776142 LOC11418360 LOC100245471 LOC107957989 LOC121214050 LOC101245353 LOC102580538 LOC107776283 LOC107820791
Function* putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta00073 Cutin, suberine and wax biosynthesis 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 3
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7493976 100776142 11418360 100245471 107957989 121214050 101245353 102580538 107776283 107820791
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