ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7495261	endonuclease 4
ppo-r.4	7495261	endonuclease 4
ppo-m.4	7495261	endonuclease 4
gma-u.5	100797334	endonuclease 4
mtr-u.5	120580720	endonuclease 4
mtr-u.5	11444005	endonuclease 4
ath-u.5	ENDO4	endonuclease 4
ath-u.5	ENDO3	endonuclease 3
ath-u.5	ENDO5	endonuclease 5
vvi-u.5	100265776	endonuclease 4
ghi-r.1	107913990	endonuclease 4-like
cit-r.1	102622801	endonuclease 4
sly-u.5	104645820	endonuclease 4
sot-r.1	102583290	endonuclease 4-like
nta-r.1	107783188	endonuclease 4-like
nta-r.1	107811282	endonuclease 4
osa-u.5	4337238	endonuclease 2
osa-u.5	4325994	endonuclease 2
zma-u.5	100170237	uncharacterized LOC100170237
zma-u.5	100282067	uncharacterized LOC100282067
tae-r.2	123076893	endonuclease 2
tae-r.2	123054894	endonuclease 4
hvu-r.1	123442443	endonuclease 2-like
hvu-r.1	123428108	endonuclease 4-like
sbi-r.1	8068497	endonuclease 2
sbi-r.1	8079601	endonuclease 2
sbi-r.1	110434010	endonuclease 2-like
bdi-r.1	100836520	endonuclease 2
bdi-r.1	100840115	endonuclease 2
bdi-r.1	100840993	endonuclease 2

Annotation

functional annotation

KEGG

GO BP

GO:0006308 [list] [network] DNA catabolic process

(5 genes)

IEA

GO CC

GO MF

GO:0004519 [list] [network] endonuclease activity	(140 genes)	IEA
GO:0003676 [list] [network] nucleic acid binding	(4002 genes)	IEA

Protein

XP_002317238.3 [sequence] [blastp]
XP_024436916.2 [sequence] [blastp]
XP_024436917.2 [sequence] [blastp]

Subcellular
localization
wolf

extr 5, E.R. 1, nucl 1, cyto 1, mito 1, plas 1, vacu 1, cyto_nucl 1, nucl_plas 1, mito_plas 1, cyto_plas 1	(predict for XP_002317238.3)
extr 5, E.R. 1, nucl 1, cyto 1, mito 1, plas 1, vacu 1, cyto_nucl 1, nucl_plas 1, mito_plas 1, cyto_plas 1	(predict for XP_024436916.2)
extr 5, E.R. 1, nucl 1, cyto 1, mito 1, plas 1, vacu 1, cyto_nucl 1, nucl_plas 1, mito_plas 1, cyto_plas 1	(predict for XP_024436917.2)

Subcellular
localization
TargetP

scret 8, mito 4	(predict for XP_002317238.3)
scret 8, mito 4	(predict for XP_024436916.2)
scret 8, mito 4	(predict for XP_024436917.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7495261	ppo-r.4 for 7495261	ppo-m.4 for 7495261	gma-u.5 for 100797334	mtr-u.5 for 120580720	mtr-u.5 for 11444005	ath-u.5 for ENDO4	ath-u.5 for ENDO3	ath-u.5 for ENDO5	vvi-u.5 for 100265776	ghi-r.1 for 107913990	cit-r.1 for 102622801	sly-u.5 for 104645820	sot-r.1 for 102583290	nta-r.1 for 107783188	nta-r.1 for 107811282	osa-u.5 for 4337238	osa-u.5 for 4325994	zma-u.5 for 100170237	zma-u.5 for 100282067	tae-r.2 for 123076893	tae-r.2 for 123054894	hvu-r.1 for 123442443	hvu-r.1 for 123428108	sbi-r.1 for 8068497	sbi-r.1 for 8079601	sbi-r.1 for 110434010	bdi-r.1 for 100836520	bdi-r.1 for 100840115	bdi-r.1 for 100840993

Ortholog

Ortholog ID: 2491

Species

ppo

gma

mtr

ath

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

ENDO4

ENDO3

ENDO5

Function^*

endonuclease 4

endonuclease 3

endonuclease 5

endonuclease 4

endonuclease 4-like

endonuclease 4

endonuclease 4-like

endonuclease 4

endonuclease 2

uncharacterized LOC100170237

uncharacterized LOC100282067

endonuclease 2

endonuclease 4

endonuclease 2-like

endonuclease 4-like

endonuclease 2

endonuclease 2-like

endonuclease 2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	7
ppo04145	Phagosome	7
ppo04142	Lysosome	4
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3
gma00630	Glyoxylate and dicarboxylate metabolism	2
gma01200	Carbon metabolism	2
gma04146	Peroxisome	2
gma00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03022	Basal transcription factors	3
ghi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	4
ghi03022	Basal transcription factors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03030	DNA replication	2
bna03410	Base excision repair	2
bna03420	Nucleotide excision repair	2
bna03430	Mismatch repair	2
bna03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	3
sly00480	Glutathione metabolism	2
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	3
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2
nta04144	Endocytosis	2
nta00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	3
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2
nta04144	Endocytosis	2
nta00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00010	Glycolysis / Gluconeogenesis	5
osa01200	Carbon metabolism	3
osa00564	Glycerophospholipid metabolism	3
osa00052	Galactose metabolism	2
osa00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00860	Porphyrin metabolism	2
zma00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00310	Lysine degradation	4
tae00010	Glycolysis / Gluconeogenesis	3
tae00053	Ascorbate and aldarate metabolism	3
tae00071	Fatty acid degradation	3
tae00260	Glycine, serine and threonine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00770	Pantothenate and CoA biosynthesis	2
sbi01230	Biosynthesis of amino acids	2
sbi00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00460	Cyanoamino acid metabolism	3
sbi00500	Starch and sucrose metabolism	3
sbi00999	Biosynthesis of various plant secondary metabolites	3
sbi00561	Glycerolipid metabolism	2
sbi00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00561	Glycerolipid metabolism	2
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00940	Phenylpropanoid biosynthesis	7
bdi00360	Phenylalanine metabolism	5
bdi00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04142	Lysosome	2

Expression

Expression pattern

Entrez Gene ID^*

7495261

100797334

120580720

11444005

828244

828245

828246

100265776

107913990

107924489

106375721

102622801

104645820

102583290

107783188

107811282

4337238

4325994

100170237

100282067

123076893

123054894

123442443

123428108

8068497

8079601

110434010

100836520

100840115

100840993

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7495261 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7495261 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	ghi	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	bna	cre	bra
Paralog	3	1	2	3	1	1	1	1	1	2	2	2	2	2	3	3	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7495261 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7495261 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**