ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7496089	uncharacterized LOC7496089
ppo-r.4	7496089	uncharacterized LOC7496089
ppo-m.4	7496089	uncharacterized LOC7496089
gma-u.5	100784891	putative methyltransferase DDB_G0268948
mtr-u.5	25499018	putative methyltransferase DDB_G0268948
mtr-u.5	11427818	putative methyltransferase DDB_G0268948
ath-u.5	AT2G41380	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
ath-u.5	AT3G54150	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
ath-u.5	AT3G61210	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
bra-r.6	103841333	methyltransferase ptaI
bra-r.6	103863257	uncharacterized LOC103863257
bra-r.6	103850297	putative methyltransferase DDB_G0268948
vvi-u.5	100853054	uncharacterized LOC100853054
vvi-u.5	100256413	uncharacterized LOC100256413
ghi-r.1	107900494	putative methyltransferase DDB_G0268948
ghi-r.1	107953819	putative methyltransferase DDB_G0268948
ghi-r.1	107911685	putative methyltransferase DDB_G0268948
bna-r.1	111202792	putative methyltransferase DDB_G0268948
bna-r.1	106416007	putative methyltransferase DDB_G0268948
bna-r.1	125581410	putative methyltransferase DDB_G0268948
cit-r.1	127899669	uncharacterized LOC127899669
cit-r.1	127900068	uncharacterized LOC127900068
sly-u.5	101256176	uncharacterized LOC101256176
sot-r.1	102596303	putative methyltransferase DDB_G0268948
sot-r.1	102598482	putative methyltransferase DDB_G0268948
nta-r.1	142170781	uncharacterized LOC142170781
nta-r.1	142170782	uncharacterized LOC142170782
nta-r.1	107779100	uncharacterized LOC107779100
osa-u.5	107278642	uncharacterized LOC107278642
osa-u.5	4325584	uncharacterized LOC4325584
osa-u.5	4324448	uncharacterized LOC4324448
zma-u.5	100284758	embryonic abundant protein-like
zma-u.5	103651542	putative methyltransferase DDB_G0268948
zma-u.5	100193403	uncharacterized LOC100193403
tae-r.2	123187136	putative methyltransferase DDB_G0268948
tae-r.2	123061694	uncharacterized LOC123061694
tae-r.2	123078793	putative methyltransferase DDB_G0268948
hvu-r.1	123424465	putative methyltransferase DDB_G0268948
hvu-r.1	123444278	putative methyltransferase DDB_G0268948
sbi-r.1	8079614	putative methyltransferase DDB_G0268948
sbi-r.1	8079615	putative methyltransferase DDB_G0268948
sbi-r.1	8082165	putative methyltransferase DDB_G0268948
bdi-r.1	100824390	putative methyltransferase DDB_G0268948
bdi-r.1	100834603	putative methyltransferase DDB_G0268948
cre-r.1	CHLRE_03g156400v5	uncharacterized protein

Top 50 coexpressed genes to 7496089 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7496089 (ppo-u.5 coexpression data)

CoexMap"7496089"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0008757 [list] [network] S-adenosylmethionine-dependent methyltransferase activity

(197 genes)

IEA

Protein

XP_002308901.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, chlo 2, pero 2, cyto_nucl 2

(predict for XP_002308901.1)

Subcellular
localization
TargetP

other 8

(predict for XP_002308901.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7496089	ppo-r.4 for 7496089	ppo-m.4 for 7496089	gma-u.5 for 100784891	mtr-u.5 for 25499018	mtr-u.5 for 11427818	ath-u.5 for AT2G41380	ath-u.5 for AT3G54150	ath-u.5 for AT3G61210	bra-r.6 for 103841333	bra-r.6 for 103863257	bra-r.6 for 103850297	vvi-u.5 for 100853054	vvi-u.5 for 100256413	ghi-r.1 for 107900494	ghi-r.1 for 107953819	ghi-r.1 for 107911685	bna-r.1 for 111202792	bna-r.1 for 106416007	bna-r.1 for 125581410	cit-r.1 for 127899669	cit-r.1 for 127900068	sly-u.5 for 101256176	sot-r.1 for 102596303	sot-r.1 for 102598482	nta-r.1 for 142170781	nta-r.1 for 142170782	nta-r.1 for 107779100	osa-u.5 for 107278642	osa-u.5 for 4325584	osa-u.5 for 4324448	zma-u.5 for 100284758	zma-u.5 for 103651542	zma-u.5 for 100193403	tae-r.2 for 123187136	tae-r.2 for 123061694	tae-r.2 for 123078793	hvu-r.1 for 123424465	hvu-r.1 for 123444278	sbi-r.1 for 8079614	sbi-r.1 for 8079615	sbi-r.1 for 8082165	bdi-r.1 for 100824390	bdi-r.1 for 100834603	cre-r.1 for CHLRE_03g156400v5

Ortholog

Ortholog ID: 1102

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC7490170

uncharacterized LOC7466865

putative methyltransferase DDB_G0268948

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

methyltransferase ptaI

putative methyltransferase DDB_G0268948

uncharacterized LOC100853054

uncharacterized LOC100853096

uncharacterized LOC100853017

putative methyltransferase DDB_G0268948

uncharacterized LOC127899669

uncharacterized LOC127899653

uncharacterized LOC101256176

putative methyltransferase DDB_G0268948

uncharacterized LOC107779100

uncharacterized LOC107787844

uncharacterized LOC107278642

uncharacterized LOC4325584

uncharacterized LOC4324448

embryonic abundant protein-like

putative methyltransferase DDB_G0268948

uncharacterized LOC100193403

putative methyltransferase DDB_G0268948

uncharacterized LOC123070344

putative methyltransferase DDB_G0268948

uncharacterized LOC8059183

putative methyltransferase DDB_G0268948

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00630	Glyoxylate and dicarboxylate metabolism	3
gma00190	Oxidative phosphorylation	2
gma00020	Citrate cycle (TCA cycle)	2
gma01200	Carbon metabolism	2
gma01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00480	Glutathione metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00480	Glutathione metabolism	5
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00480	Glutathione metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00460	Cyanoamino acid metabolism	2
bra00620	Pyruvate metabolism	2
bra00710	Carbon fixation by Calvin cycle	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01230	Biosynthesis of amino acids	3
vvi00941	Flavonoid biosynthesis	3
vvi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna02010	ABC transporters	2
bna00460	Cyanoamino acid metabolism	2
bna00500	Starch and sucrose metabolism	2
bna00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00040	Pentose and glucuronate interconversions	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	2
sly01230	Biosynthesis of amino acids	2
sly00630	Glyoxylate and dicarboxylate metabolism	2
sly00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	3
sot01230	Biosynthesis of amino acids	3
sot00350	Tyrosine metabolism	2
sot00270	Cysteine and methionine metabolism	2
sot00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	7
sot04075	Plant hormone signal transduction	7
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3
tae00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	4
sbi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04016	MAPK signaling pathway - plant	2
bdi04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

7490170

7466865

100784891

25499018

11427818

818736

824582

841992

103841333

103865882

103829784

100853054

100853096

100853017

107900494

107911685

107900493

106406451

106376529

106411579

127899669

127899653

101256176

102596303

102598482

107779100

107787844

107278642

4325584

4324448

100284758

103651542

100193403

123078793

123070344

123424465

123444278

8079614

8082165

8059183

100824390

100834603

66052738

The preparation time of this page was 0.5 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	1	2	3	3	2	3	3	2	1	2	3	3	3	3	2	3	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7496089 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7496089 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**