ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7496945	(+)-neomenthol dehydrogenase
ppo-r.4	7496945	(+)-neomenthol dehydrogenase
ppo-m.4	7496945	(+)-neomenthol dehydrogenase
ppo-u.5	7461754	(+)-neomenthol dehydrogenase
gma-u.5	100803877	short-chain dehydrogenase/reductase domain-containing protein
gma-u.5	106797124	(+)-neomenthol dehydrogenase
gma-u.5	100804943	(+)-neomenthol dehydrogenase
mtr-u.5	25500937	(+)-neomenthol dehydrogenase
mtr-u.5	11409642	(+)-neomenthol dehydrogenase
ath-u.5	SDR2	NAD(P)-binding Rossmann-fold superfamily protein
ath-u.5	SDR1	NAD(P)-binding Rossmann-fold superfamily protein
ath-u.5	AT1G01800	NAD(P)-binding Rossmann-fold superfamily protein
bra-r.6	103841948	(+)-neomenthol dehydrogenase
bra-r.6	103844683	(+)-neomenthol dehydrogenase
bra-r.6	103862836	(+)-neomenthol dehydrogenase
vvi-u.5	104881904	(+)-neomenthol dehydrogenase
vvi-u.5	100248285	(+)-neomenthol dehydrogenase
vvi-u.5	100253349	(+)-neomenthol dehydrogenase
ghi-r.1	107953124	salutaridine reductase
ghi-r.1	107954547	(+)-neomenthol dehydrogenase
ghi-r.1	107952927	(+)-neomenthol dehydrogenase
bna-r.1	106445008	(+)-neomenthol dehydrogenase
bna-r.1	106358390	(+)-neomenthol dehydrogenase
bna-r.1	106370838	(+)-neomenthol dehydrogenase
cit-r.1	127898663	(+)-neomenthol dehydrogenase-like
cit-r.1	127901382	(+)-neomenthol dehydrogenase-like
cit-r.1	127901472	(+)-neomenthol dehydrogenase-like
sly-u.5	101260280	carbonyl reductase-like
sly-u.5	101261456	(+)-neomenthol dehydrogenase-like
sly-u.5	101263847	(+)-neomenthol dehydrogenase
sot-r.1	102590047	short-chain dehydrogenase/reductase 2b-like
sot-r.1	102592171	short-chain dehydrogenase/reductase 2b-like
nta-r.1	107805342	short-chain dehydrogenase/reductase 1
nta-r.1	107759800	short-chain dehydrogenase/reductase 2b-like
nta-r.1	107759802	short-chain dehydrogenase/reductase 1-like
osa-u.5	4336495	salutaridine reductase
osa-u.5	9271852	salutaridine reductase
osa-u.5	4330113	(+)-neomenthol dehydrogenase
zma-u.5	100273052	uncharacterized LOC100273052
zma-u.5	100191789	(+)-neomenthol dehydrogenase
zma-u.5	100192556	uncharacterized LOC100192556
tae-r.2	123046026	(+)-neomenthol dehydrogenase
hvu-r.1	123427337	salutaridine reductase-like
hvu-r.1	123408250	(+)-neomenthol dehydrogenase-like
sbi-r.1	8083313	salutaridine reductase
sbi-r.1	8083006	(+)-neomenthol dehydrogenase
sbi-r.1	8082885	uncharacterized LOC8082885
bdi-r.1	112269522	salutaridine reductase-like
bdi-r.1	100838437	(+)-neomenthol dehydrogenase-like

Top 50 coexpressed genes to 7496945 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7496945 (ppo-u.5 coexpression data)

CoexMap"7496945"

[Cytoscape]

Annotation

functional annotation

KEGG

pop00902 [list] [network] Monoterpenoid biosynthesis (14 genes)

GO BP

GO CC

GO:0016020 [list] [network] membrane

(3780 genes)

IEA

GO MF

GO:0016616 [list] [network] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

(237 genes)

IEA

Protein

XP_024440102.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 3, pero 3, cyto_pero 3

(predict for XP_024440102.2)

Subcellular
localization
TargetP

other 7

(predict for XP_024440102.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7496945	ppo-r.4 for 7496945	ppo-m.4 for 7496945	ppo-u.5 for 7461754	gma-u.5 for 100803877	gma-u.5 for 106797124	gma-u.5 for 100804943	mtr-u.5 for 25500937	mtr-u.5 for 11409642	ath-u.5 for SDR2	ath-u.5 for SDR1	ath-u.5 for AT1G01800	bra-r.6 for 103841948	bra-r.6 for 103844683	bra-r.6 for 103862836	vvi-u.5 for 104881904	vvi-u.5 for 100248285	vvi-u.5 for 100253349	ghi-r.1 for 107953124	ghi-r.1 for 107954547	ghi-r.1 for 107952927	bna-r.1 for 106445008	bna-r.1 for 106358390	bna-r.1 for 106370838	cit-r.1 for 127898663	cit-r.1 for 127901382	cit-r.1 for 127901472	sly-u.5 for 101260280	sly-u.5 for 101261456	sly-u.5 for 101263847	sot-r.1 for 102590047	sot-r.1 for 102592171	nta-r.1 for 107805342	nta-r.1 for 107759800	nta-r.1 for 107759802	osa-u.5 for 4336495	osa-u.5 for 9271852	osa-u.5 for 4330113	zma-u.5 for 100273052	zma-u.5 for 100191789	zma-u.5 for 100192556	tae-r.2 for 123046026	hvu-r.1 for 123427337	hvu-r.1 for 123408250	sbi-r.1 for 8083313	sbi-r.1 for 8083006	sbi-r.1 for 8082885	bdi-r.1 for 112269522	bdi-r.1 for 100838437

Ortholog

Ortholog ID: 248

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

SDR2

SDR1

Function^*

(+)-neomenthol dehydrogenase

(-)-isopiperitenone reductase

short-chain dehydrogenase/reductase domain-containing protein

(+)-neomenthol dehydrogenase

NAD(P)-binding Rossmann-fold superfamily protein

(+)-neomenthol dehydrogenase

(+)-neomenthol dehydrogenase-like

carbonyl reductase-like

short-chain dehydrogenase/reductase 2b

(+)-neomenthol dehydrogenase-like

uncharacterized LOC107769229

(+)-neomenthol dehydrogenase

short-chain dehydrogenase/reductase 1

salutaridine reductase

short-chain dehydrogenase/reductase 2b

(+)-neomenthol dehydrogenase

uncharacterized LOC100192556

uncharacterized LOC100282122

short-chain dehydrogenase/reductase 2b

(-)-isopiperitenone reductase

salutaridine reductase-like

(+)-neomenthol dehydrogenase-like

salutaridine reductase-like

salutaridine reductase

(+)-neomenthol dehydrogenase-like

short-chain dehydrogenase/reductase 2b

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00943	Isoflavonoid biosynthesis	3
gma00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	4
gma00010	Glycolysis / Gluconeogenesis	2
gma00020	Citrate cycle (TCA cycle)	2
gma00620	Pyruvate metabolism	2
gma00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00902	Monoterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00902	Monoterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00902	Monoterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00900	Terpenoid backbone biosynthesis	2
ath00902	Monoterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00511	Other glycan degradation	3
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00902	Monoterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00902	Monoterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00902	Monoterpenoid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	4
ghi04145	Phagosome	2
ghi04148	Efferocytosis	2
ghi00062	Fatty acid elongation	2
ghi01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00040	Pentose and glucuronate interconversions	3
bna00051	Fructose and mannose metabolism	3
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00902	Monoterpenoid biosynthesis	3
bna00940	Phenylpropanoid biosynthesis	3
bna00944	Flavone and flavonol biosynthesis	2
bna00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00902	Monoterpenoid biosynthesis	3
bna00940	Phenylpropanoid biosynthesis	3
bna00944	Flavone and flavonol biosynthesis	2
bna00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00904	Diterpenoid biosynthesis	2
cit00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00902	Monoterpenoid biosynthesis	3
cit00940	Phenylpropanoid biosynthesis	2
cit00941	Flavonoid biosynthesis	2
cit00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00902	Monoterpenoid biosynthesis	3
cit00940	Phenylpropanoid biosynthesis	2
cit00941	Flavonoid biosynthesis	2
cit00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00902	Monoterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00902	Monoterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00902	Monoterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00902	Monoterpenoid biosynthesis	3
nta00592	alpha-Linolenic acid metabolism	3
nta00760	Nicotinate and nicotinamide metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00902	Monoterpenoid biosynthesis	3
nta00592	alpha-Linolenic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00020	Citrate cycle (TCA cycle)	4
nta00270	Cysteine and methionine metabolism	4
nta00566	Sulfoquinovose metabolism	4
nta00620	Pyruvate metabolism	4
nta00630	Glyoxylate and dicarboxylate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	6
zma00061	Fatty acid biosynthesis	2
zma00780	Biotin metabolism	2
zma01212	Fatty acid metabolism	2
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00902	Monoterpenoid biosynthesis	2
zma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00902	Monoterpenoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01200	Carbon metabolism	5
tae00710	Carbon fixation by Calvin cycle	3
tae00195	Photosynthesis	3
tae00630	Glyoxylate and dicarboxylate metabolism	2
tae04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00480	Glutathione metabolism	5
sbi00902	Monoterpenoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00480	Glutathione metabolism	5
sbi00902	Monoterpenoid biosynthesis	4
sbi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00480	Glutathione metabolism	5

Expression

Expression pattern

Entrez Gene ID^*

7461754

18109187

100803877

102663482

25500937

25500936

25498884

816953

825294

839259

103841948

103844683

103862836

100248214

107952926

107952923

107911966

106370838

106411616

106416137

127898663

127901472

102610031

101268235

108281193

101258035

107061804

102606373

107769229

107772451

107795542

9271852

4336492

4344332

100191789

100192556

100282122

123189798

123189796

123427337

123427336

123427338

8078892

8078893

100838437

100832686

The preparation time of this page was 0.1 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	3	3	3	3	3	3	2	3	3	3	1	2	3	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7496945 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7496945 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**