ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7496984	uncharacterized LOC7496984
ppo-r.4	7496984	uncharacterized LOC7496984
ppo-m.4	7496984	uncharacterized LOC7496984
gma-u.5	100816545	uncharacterized LOC100816545
gma-u.5	100787532	uncharacterized LOC100787532
gma-u.5	100778959	uncharacterized LOC100778959
mtr-u.5	25500862	uncharacterized LOC25500862
mtr-u.5	120576922	uncharacterized LOC120576922
ath-u.5	AT2G46060	transmembrane protein-like protein
bra-r.6	103866945	uncharacterized LOC103866945
bra-r.6	103866263	uncharacterized LOC103866263
vvi-u.5	100258534	uncharacterized LOC100258534
ghi-r.1	121203030	uncharacterized LOC121203030
ghi-r.1	107923911	uncharacterized LOC107923911
ghi-r.1	107900879	uncharacterized LOC107900879
bna-r.1	111199810	uncharacterized LOC111199810
bna-r.1	106392017	uncharacterized LOC106392017
bna-r.1	106450923	uncharacterized LOC106450923
cit-r.1	102613328	uncharacterized LOC102613328
cit-r.1	127901525	uncharacterized LOC127901525
sly-u.5	101248424	uncharacterized LOC101248424
sot-r.1	102605461	uncharacterized LOC102605461
nta-r.1	107786675	uncharacterized LOC107786675
nta-r.1	107807618	uncharacterized LOC107807618
osa-u.5	4348750	uncharacterized LOC4348750
zma-u.5	100502194	uncharacterized LOC100502194
tae-r.2	123044335	uncharacterized LOC123044335
tae-r.2	123180945	uncharacterized LOC123180945
tae-r.2	123119496	uncharacterized LOC123119496
hvu-r.1	123429886	uncharacterized LOC123429886
sbi-r.1	110430340	uncharacterized LOC110430340
bdi-r.1	100844795	uncharacterized LOC100844795

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane

(1125 genes)

IEA

GO MF

Protein

XP_024440163.1 [sequence] [blastp]
XP_024440164.1 [sequence] [blastp]
XP_024440165.1 [sequence] [blastp]
XP_052302779.1 [sequence] [blastp]
XP_052302781.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, chlo 1, mito 1, E.R. 1, pero 1	(predict for XP_024440163.1)
chlo 9, nucl 1, plas 1, nucl_plas 1	(predict for XP_024440164.1)
chlo 9, nucl 1, plas 1, nucl_plas 1	(predict for XP_024440165.1)
plas 7, chlo 1, mito 1, E.R. 1, pero 1, chlo_mito 1	(predict for XP_052302779.1)
chlo 9, nucl 1, plas 1, nucl_plas 1	(predict for XP_052302781.1)

Subcellular
localization
TargetP

scret 8	(predict for XP_024440163.1)
other 5	(predict for XP_024440164.1)
other 5	(predict for XP_024440165.1)
scret 8	(predict for XP_052302779.1)
other 5	(predict for XP_052302781.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7496984	ppo-r.4 for 7496984	ppo-m.4 for 7496984	gma-u.5 for 100816545	gma-u.5 for 100787532	gma-u.5 for 100778959	mtr-u.5 for 25500862	mtr-u.5 for 120576922	ath-u.5 for AT2G46060	bra-r.6 for 103866945	bra-r.6 for 103866263	vvi-u.5 for 100258534	ghi-r.1 for 121203030	ghi-r.1 for 107923911	ghi-r.1 for 107900879	bna-r.1 for 111199810	bna-r.1 for 106392017	bna-r.1 for 106450923	cit-r.1 for 102613328	cit-r.1 for 127901525	sly-u.5 for 101248424	sot-r.1 for 102605461	nta-r.1 for 107786675	nta-r.1 for 107807618	osa-u.5 for 4348750	zma-u.5 for 100502194	tae-r.2 for 123044335	tae-r.2 for 123180945	tae-r.2 for 123119496	hvu-r.1 for 123429886	sbi-r.1 for 110430340	bdi-r.1 for 100844795

Ortholog

Ortholog ID: 6850

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC7496984

uncharacterized LOC100816545

uncharacterized LOC100787532

uncharacterized LOC100777848

uncharacterized LOC25500862

uncharacterized LOC120576922

transmembrane protein-like protein

uncharacterized LOC103866945

uncharacterized LOC103866263

uncharacterized LOC100258534

uncharacterized LOC121203030

uncharacterized LOC107923911

uncharacterized LOC107900879

uncharacterized LOC111199810

uncharacterized LOC106392017

uncharacterized LOC106450857

uncharacterized LOC102613328

uncharacterized LOC127901525

uncharacterized LOC101248424

uncharacterized LOC102605461

uncharacterized LOC107786675

uncharacterized LOC107807618

uncharacterized LOC4348750

uncharacterized LOC100502194

uncharacterized LOC123044335

uncharacterized LOC123180945

uncharacterized LOC123119496

uncharacterized LOC123429886

uncharacterized LOC110430340

uncharacterized LOC100844795

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04148	Efferocytosis	3
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	2
gma04148	Efferocytosis	2
gma04075	Plant hormone signal transduction	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr02010	ABC transporters	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	Nucleocytoplasmic transport	4
ath03018	RNA degradation	4
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	4
bra00190	Oxidative phosphorylation	2
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	3
bra04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	4
ghi04075	Plant hormone signal transduction	4
ghi04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	8
bna00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00760	Nicotinate and nicotinamide metabolism	2
cit01240	Biosynthesis of cofactors	2
cit03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00760	Nicotinate and nicotinamide metabolism	2
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00511	Other glycan degradation	2
osa00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00531	Glycosaminoglycan degradation	2
bdi04142	Lysosome	2

Expression

Expression pattern

Entrez Gene ID^*

7496984

100816545

100787532

100777848

25500862

120576922

819214

103866945

103866263

100258534

121203030

107923911

107900879

111199810

106392017

106450857

102613328

127901525

101248424

102605461

107786675

107807618

4348750

100502194

123044335

123180945

123119496

123429886

110430340

100844795

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7496984 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7496984 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	3	2	1	2	1	3	3	2	1	1	2	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7496984 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7496984 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**