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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7497358   40S ribosomal protein S13-1 
 ppo-r.4   7497358   40S ribosomal protein S13-1 
 ppo-u.5   7482181   40S ribosomal protein S13-2 
 ppo-u.5   7476757   40S ribosomal protein S13 
 ppo-u.5   7461714   40S ribosomal protein S13 
 gma-u.5   100790163   40S ribosomal protein S13 
 gma-u.5   100781750   40S ribosomal protein S13 
 gma-u.5   RPS13   ribosomal protein S13 
 mtr-u.5   11443116   40S ribosomal protein S13 
 mtr-u.5   11425556   40S ribosomal protein S13 
 mtr-u.5   11409996   40S ribosomal protein S13 
 ath-u.5   RPS13A   ribosomal protein S13A 
 ath-u.5   AT3G60770   Ribosomal protein S13/S15 
 bra-r.6   103830271   40S ribosomal protein S13-2 
 bra-r.6   103862863   40S ribosomal protein S13-2 
 vvi-u.5   100242146   small ribosomal subunit protein uS15 
 vvi-u.5   100242961   small ribosomal subunit protein uS15 
 ghi-r.1   107890823   40S ribosomal protein S13 
 ghi-r.1   107900848   40S ribosomal protein S13 
 ghi-r.1   107920890   40S ribosomal protein S13 
 bna-r.1   106411904   40S ribosomal protein S13-2 
 bna-r.1   106390357   40S ribosomal protein S13-2-like 
 bna-r.1   106353110   40S ribosomal protein S13-2 
 cit-r.1   102619943   40S ribosomal protein S13 
 cit-r.1   102623025   40S ribosomal protein S13 
 sly-u.5   101264827   small ribosomal subunit protein uS15 
 sly-u.5   101250446   small ribosomal subunit protein uS15 
 sly-u.5   101245893   small ribosomal subunit protein uS15 
 sot-r.1   102587574   40S ribosomal protein S13-like 
 sot-r.1   102586531   40S ribosomal protein S13 
 sot-r.1   102595052   40S ribosomal protein S13 
 nta-r.1   107789793   small ribosomal subunit protein uS15 
 nta-r.1   107789702   small ribosomal subunit protein uS15 
 nta-r.1   107790766   small ribosomal subunit protein uS15 
 osa-u.5   4344523   40S ribosomal protein S13-1 
 osa-u.5   4343679   small ribosomal subunit protein uS15y-like 
 osa-u.5   4344524   40S ribosomal protein S13-2-like 
 zma-u.5   100272255   ribosomal protein13 
 zma-u.5   100216794   40S ribosomal protein S13 
 zma-u.5   542726   ribosomal protein13 
 tae-r.2   123052329   40S ribosomal protein S13-1 
 tae-r.2   543174   40S ribosomal protein S13-1 
 tae-r.2   123147547   40S ribosomal protein S13-1 
 hvu-r.1   123425609   40S ribosomal protein S13-1-like 
 hvu-r.1   123407256   40S ribosomal protein S13-1 
 sbi-r.1   8066106   40S ribosomal protein S13 
 sbi-r.1   8066103   40S ribosomal protein S13 
 sbi-r.1   8055671   40S ribosomal protein S13-1 
 bdi-r.1   100839929   40S ribosomal protein S13 
 bdi-r.1   100825183   40S ribosomal protein S13-1 
 bdi-r.1   100840839   40S ribosomal protein S13 
 cre-r.1   CHLRE_07g331900v5   ribosomal protein S13 

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Top 50 coexpressed genes to 7497358 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7497358 (ppo-u.5 coexpression data)

CoexMap"7497358"


ppoLOC7497358 | Entrez gene ID : 7497358    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 3 2 2 2 3 3 2 3 3 3 3 3 3 2 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (109 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (220 genes)  IEA  
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO MF
GO:0070181 [list] [network] small ribosomal subunit rRNA binding  (15 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_002320718.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 4  (predict for XP_002320718.1)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for XP_002320718.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7497358
ppo-r.4
for
7497358
ppo-u.5
for
7482181
ppo-u.5
for
7476757
ppo-u.5
for
7461714
gma-u.5
for
100790163
gma-u.5
for
100781750
gma-u.5
for
RPS13
mtr-u.5
for
11443116
mtr-u.5
for
11425556
mtr-u.5
for
11409996
ath-u.5
for
RPS13A
ath-u.5
for
AT3G60770
bra-r.6
for
103830271
bra-r.6
for
103862863
vvi-u.5
for
100242146
vvi-u.5
for
100242961
ghi-r.1
for
107890823
ghi-r.1
for
107900848
ghi-r.1
for
107920890
bna-r.1
for
106411904
bna-r.1
for
106390357
bna-r.1
for
106353110
cit-r.1
for
102619943
cit-r.1
for
102623025
sly-u.5
for
101264827
sly-u.5
for
101250446
sly-u.5
for
101245893
sot-r.1
for
102587574
sot-r.1
for
102586531
sot-r.1
for
102595052
nta-r.1
for
107789793
nta-r.1
for
107789702
nta-r.1
for
107790766
osa-u.5
for
4344523
osa-u.5
for
4343679
osa-u.5
for
4344524
zma-u.5
for
100272255
zma-u.5
for
100216794
zma-u.5
for
542726
tae-r.2
for
123052329
tae-r.2
for
543174
tae-r.2
for
123147547
hvu-r.1
for
123425609
hvu-r.1
for
123407256
sbi-r.1
for
8066106
sbi-r.1
for
8066103
sbi-r.1
for
8055671
bdi-r.1
for
100839929
bdi-r.1
for
100825183
bdi-r.1
for
100840839
cre-r.1
for
CHLRE_07g331900v5


Ortholog ID: 1210
Species ppo ppo ppo gma gma gma mtr mtr mtr ath ath bra bra bra vvi vvi ghi ghi ghi bna bna bna cit cit sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC7482181 LOC7476757 LOC7461714 LOC100790163 LOC100781750 RPS13 LOC11443116 LOC11425556 LOC11409996 RPS13A AT3G60770 LOC103862863 LOC103866881 LOC103854679 LOC100242146 LOC100242961 LOC107930160 LOC121204480 LOC107952900 LOC106390357 LOC111215159 LOC106452584 LOC102619943 LOC102623025 LOC101264827 LOC101250446 ACI39 LOC102587574 LOC102586531 LOC102582176 LOC107827027 LOC107808791 LOC142177559 LOC4344523 LOC4343679 LOC4344524 LOC100272255 LOC100216794 LOC542726 LOC123052329 LOC123147547 LOC123188080 LOC123425609 LOC123407256 LOC8066106 LOC8066103 LOC8055671 LOC100839929 LOC100825183 LOC100840839 CHLRE_07g331900v5
Function* 40S ribosomal protein S13-2 40S ribosomal protein S13 40S ribosomal protein S13 40S ribosomal protein S13 40S ribosomal protein S13 ribosomal protein S13 40S ribosomal protein S13 40S ribosomal protein S13 40S ribosomal protein S13 ribosomal protein S13A Ribosomal protein S13/S15 40S ribosomal protein S13-2 40S ribosomal protein S13-2 40S ribosomal protein S13-2-like small ribosomal subunit protein uS15 small ribosomal subunit protein uS15 40S ribosomal protein S13 40S ribosomal protein S13 40S ribosomal protein S13 40S ribosomal protein S13-2-like 40S ribosomal protein S13-2 40S ribosomal protein S13-2 40S ribosomal protein S13 40S ribosomal protein S13 small ribosomal subunit protein uS15 small ribosomal subunit protein uS15 cytoplasmic ribosomal protein S13 40S ribosomal protein S13-like 40S ribosomal protein S13 40S ribosomal protein S13-like small ribosomal subunit protein uS15-like small ribosomal subunit protein uS15 small ribosomal subunit protein uS15-like 40S ribosomal protein S13-1 small ribosomal subunit protein uS15y-like 40S ribosomal protein S13-2-like ribosomal protein13 40S ribosomal protein S13 ribosomal protein13 40S ribosomal protein S13-1 40S ribosomal protein S13-1 40S ribosomal protein S13-1 40S ribosomal protein S13-1-like 40S ribosomal protein S13-1 40S ribosomal protein S13 40S ribosomal protein S13 40S ribosomal protein S13-1 40S ribosomal protein S13 40S ribosomal protein S13-1 40S ribosomal protein S13 ribosomal protein S13
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03013 Nucleocytoplasmic transport 3
mtr03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi00053 Ascorbate and aldarate metabolism 3
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
ghi00053 Ascorbate and aldarate metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 19
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 19
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
hvu03018 RNA degradation 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 15
bdi03040 Spliceosome 3
bdi03013 Nucleocytoplasmic transport 2
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 19
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7482181 7476757 7461714 100790163 100781750 547745 11443116 11425556 11409996 828167 825248 103862863 103866881 103854679 100242146 100242961 107930160 121204480 107952900 106390357 111215159 106452584 102619943 102623025 101264827 101250446 778333 102587574 102586531 102582176 107827027 107808791 142177559 4344523 4343679 4344524 100272255 100216794 542726 123052329 123147547 123188080 123425609 123407256 8066106 8066103 8055671 100839929 100825183 100840839 5716018
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