ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7497652	uncharacterized LOC7497652
ppo-r.4	7497652	uncharacterized LOC7497652
ppo-m.4	7497652	uncharacterized LOC7497652
ppo-u.5	7469936	uncharacterized LOC7469936
gma-u.5	100807300	uncharacterized LOC100807300
gma-u.5	100813820	uncharacterized LOC100813820
gma-u.5	100814491	uncharacterized LOC100814491
mtr-u.5	11431189	uncharacterized LOC11431189
mtr-u.5	11412968	uncharacterized LOC11412968
ath-u.5	AT2G15910	CSL zinc finger domain-containing protein
ath-u.5	AT3G11800	Expp1 protein
ath-u.5	AT3G44150	Expp1 protein
bra-r.6	103859409	uncharacterized LOC103859409
bra-r.6	103860439	uncharacterized LOC103860439
bra-r.6	103870308	uncharacterized LOC103870308
vvi-u.5	100249592	uncharacterized LOC100249592
ghi-r.1	107928218	uncharacterized LOC107928218
ghi-r.1	107925677	uncharacterized LOC107925677
bna-r.1	106416238	uncharacterized LOC106416238
bna-r.1	BNAA03G31950D	uncharacterized BNAA03G31950D
bna-r.1	106347692	uncharacterized LOC106347692
cit-r.1	102630770	uncharacterized LOC102630770
sly-u.5	101250348	uncharacterized LOC101250348
sly-u.5	101246776	uncharacterized LOC101246776
sot-r.1	102601073	uncharacterized LOC102601073
sot-r.1	102588286	uncharacterized LOC102588286
nta-r.1	107772566	uncharacterized LOC107772566
nta-r.1	107796978	uncharacterized LOC107796978
nta-r.1	107790292	uncharacterized LOC107790292
osa-u.5	4333576	uncharacterized LOC4333576
zma-u.5	100273005	expp1 protein
zma-u.5	100281966	expp1 protein
zma-u.5	100283623	uncharacterized LOC100283623
tae-r.2	123104897	uncharacterized LOC123104897
tae-r.2	123105330	uncharacterized LOC123105330
tae-r.2	123122711	uncharacterized LOC123122711
hvu-r.1	123397204	protein IQ-DOMAIN 5-like
hvu-r.1	123452099	uncharacterized LOC123452099
sbi-r.1	8083910	uncharacterized LOC8083910
sbi-r.1	8062204	uncharacterized LOC8062204
bdi-r.1	100825689	uncharacterized LOC100825689
cre-r.1	CHLRE_06g287800v5	uncharacterized protein

Top 50 coexpressed genes to 7497652 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7497652 (ppo-u.5 coexpression data)

CoexMap"7497652"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0017183 [list] [network] protein histidyl modification to diphthamide	(9 genes)	IEA
GO:0002098 [list] [network] tRNA wobble uridine modification	(19 genes)	IEA

GO CC

GO:0005829 [list] [network] cytosol	(1141 genes)	IEA
GO:0005634 [list] [network] nucleus	(3662 genes)	IEA

GO MF

GO:0046872 [list] [network] metal ion binding

(2135 genes)

IEA

Protein

XP_002309260.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 6, vacu 2, chlo 1

(predict for XP_002309260.1)

Subcellular
localization
TargetP

scret 4

(predict for XP_002309260.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7497652	ppo-r.4 for 7497652	ppo-m.4 for 7497652	ppo-u.5 for 7469936	gma-u.5 for 100807300	gma-u.5 for 100813820	gma-u.5 for 100814491	mtr-u.5 for 11431189	mtr-u.5 for 11412968	ath-u.5 for AT2G15910	ath-u.5 for AT3G11800	ath-u.5 for AT3G44150	bra-r.6 for 103859409	bra-r.6 for 103860439	bra-r.6 for 103870308	vvi-u.5 for 100249592	ghi-r.1 for 107928218	ghi-r.1 for 107925677	bna-r.1 for 106416238	bna-r.1 for BNAA03G31950D	bna-r.1 for 106347692	cit-r.1 for 102630770	sly-u.5 for 101250348	sly-u.5 for 101246776	sot-r.1 for 102601073	sot-r.1 for 102588286	nta-r.1 for 107772566	nta-r.1 for 107796978	nta-r.1 for 107790292	osa-u.5 for 4333576	zma-u.5 for 100273005	zma-u.5 for 100281966	zma-u.5 for 100283623	tae-r.2 for 123104897	tae-r.2 for 123105330	tae-r.2 for 123122711	hvu-r.1 for 123397204	hvu-r.1 for 123452099	sbi-r.1 for 8083910	sbi-r.1 for 8062204	bdi-r.1 for 100825689	cre-r.1 for CHLRE_06g287800v5

Ortholog

Ortholog ID: 2446

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC7497652

uncharacterized LOC7469936

uncharacterized LOC100807300

uncharacterized LOC100818051

uncharacterized LOC100795287

uncharacterized LOC11431189

uncharacterized LOC11412968

CSL zinc finger domain-containing protein

Expp1 protein

uncharacterized LOC103859409

uncharacterized LOC103870308

uncharacterized LOC103848053

uncharacterized LOC100249592

uncharacterized LOC107928218

uncharacterized LOC121228147

uncharacterized LOC106349369

uncharacterized LOC106452500

uncharacterized LOC106418500

uncharacterized LOC102630770

uncharacterized LOC101250348

uncharacterized LOC101246776

uncharacterized LOC102601073

uncharacterized LOC102588286

uncharacterized LOC107772566

uncharacterized LOC107773105

uncharacterized LOC107778721

uncharacterized LOC4333576

expp1 protein

uncharacterized LOC100283623

uncharacterized LOC123104897

uncharacterized LOC123105330

uncharacterized LOC123122711

protein IQ-DOMAIN 5-like

uncharacterized LOC123452099

uncharacterized LOC8083910

uncharacterized LOC8062204

uncharacterized LOC100825689

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	3
ppo04145	Phagosome	3
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	3
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04130	SNARE interactions in vesicular transport	2
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00030	Pentose phosphate pathway	2
gma00710	Carbon fixation by Calvin cycle	2
gma01200	Carbon metabolism	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00040	Pentose and glucuronate interconversions	2
mtr00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	5
bra04145	Phagosome	5
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04130	SNARE interactions in vesicular transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00061	Fatty acid biosynthesis	4
bra01212	Fatty acid metabolism	4
bra00780	Biotin metabolism	3
bra01240	Biosynthesis of cofactors	3
bra00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	3
vvi04142	Lysosome	2
vvi04145	Phagosome	2
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	7
ghi04144	Endocytosis	3
ghi00511	Other glycan degradation	2
ghi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	4
ghi00562	Inositol phosphate metabolism	2
ghi04070	Phosphatidylinositol signaling system	2
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03272	Virion - Hepatitis viruses	2
cit04144	Endocytosis	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	6
sly04145	Phagosome	6
sly04142	Lysosome	5
sly04626	Plant-pathogen interaction	3
sly04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00908	Zeatin biosynthesis	3
sot00960	Tropane, piperidine and pyridine alkaloid biosynthesis	3
sot00220	Arginine biosynthesis	2
sot00250	Alanine, aspartate and glutamate metabolism	2
sot00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	4
sot04142	Lysosome	4
sot04145	Phagosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2
nta04142	Lysosome	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	5
nta04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04814	Motor proteins	6
osa04145	Phagosome	4
osa04517	IgSF CAM signaling	4
osa00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03050	Proteasome	6
zma00510	N-Glycan biosynthesis	2
zma00513	Various types of N-glycan biosynthesis	2
zma04141	Protein processing in endoplasmic reticulum	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00510	N-Glycan biosynthesis	2
zma00513	Various types of N-glycan biosynthesis	2
zma04141	Protein processing in endoplasmic reticulum	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04145	Phagosome	2
tae04517	IgSF CAM signaling	2
tae04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04145	Phagosome	8
tae04517	IgSF CAM signaling	8
tae04814	Motor proteins	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03083	Polycomb repressive complex	2
sbi04120	Ubiquitin mediated proteolysis	2
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00670	One carbon pool by folate	4
bdi00270	Cysteine and methionine metabolism	3
bdi01230	Biosynthesis of amino acids	3
bdi00520	Amino sugar and nucleotide sugar metabolism	3
bdi01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	6
cre03272	Virion - Hepatitis viruses	3
cre03250	Viral life cycle - HIV-1	2

Expression

Expression pattern

Entrez Gene ID^*

7497652

7469936

100807300

100818051

100795287

11431189

11412968

816087

820353

103859409

103870308

103848053

100249592

107928218

121228147

106349369

106452500

106418500

102630770

101250348

101246776

102601073

102588286

107772566

107773105

107778721

4333576

100273005

100281966

100283623

123104897

123105330

123122711

123397204

123452099

8083910

8062204

100825689

5721042

The preparation time of this page was 0.1 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	3	1	2	3	1	2	2	3	1	3	3	2	2	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7497652 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7497652 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**