ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7498073	uncharacterized LOC7498073
ppo-r.4	7498073	uncharacterized LOC7498073
ppo-m.4	7498073	uncharacterized LOC7498073
ppo-u.5	7473411	uncharacterized LOC7473411
gma-u.5	100785586	uncharacterized LOC100785586
gma-u.5	100809860	uncharacterized LOC100809860
ath-u.5	AT3G22520	spindle assembly abnormal protein
ath-u.5	AT4G14840	spindle assembly abnormal protein
bra-r.6	103834482	uncharacterized LOC103834482
bra-r.6	103859960	uncharacterized LOC103859960
bra-r.6	103868344	uncharacterized LOC103868344
vvi-u.5	100257987	uncharacterized LOC100257987
ghi-r.1	107928540	uncharacterized LOC107928540
ghi-r.1	107929117	uncharacterized LOC107929117
ghi-r.1	107942678	uncharacterized LOC107942678
bna-r.1	111214190	uncharacterized LOC111214190
bna-r.1	125587708	uncharacterized LOC125587708
bna-r.1	125596858	uncharacterized LOC125596858
cit-r.1	102609149	uncharacterized LOC102609149
sly-u.5	101245884	uncharacterized LOC101245884
sot-r.1	102604673	uncharacterized LOC102604673
nta-r.1	107816309	uncharacterized LOC107816309
nta-r.1	107778449	uncharacterized LOC107778449

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_024465380.1 [sequence] [blastp]
XP_024465381.1 [sequence] [blastp]
XP_024465382.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto 1, cysk 1	(predict for XP_024465380.1)
nucl 9, cyto 1, cysk 1	(predict for XP_024465381.1)
nucl 9, cyto 1, cysk 1	(predict for XP_024465382.1)

Subcellular
localization
TargetP

other 8	(predict for XP_024465380.1)
other 8	(predict for XP_024465381.1)
other 8	(predict for XP_024465382.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7498073	ppo-r.4 for 7498073	ppo-m.4 for 7498073	ppo-u.5 for 7473411	gma-u.5 for 100785586	gma-u.5 for 100809860	ath-u.5 for AT3G22520	ath-u.5 for AT4G14840	bra-r.6 for 103834482	bra-r.6 for 103859960	bra-r.6 for 103868344	vvi-u.5 for 100257987	ghi-r.1 for 107928540	ghi-r.1 for 107929117	ghi-r.1 for 107942678	bna-r.1 for 111214190	bna-r.1 for 125587708	bna-r.1 for 125596858	cit-r.1 for 102609149	sly-u.5 for 101245884	sot-r.1 for 102604673	nta-r.1 for 107816309	nta-r.1 for 107778449

Ortholog

Ortholog ID: 6569

Species

ppo

gma

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

Symbol

Function^*

uncharacterized LOC7498073

uncharacterized LOC7473411

uncharacterized LOC100809860

spindle assembly abnormal protein

uncharacterized LOC103834482

uncharacterized LOC103868344

uncharacterized LOC103869032

uncharacterized LOC100257987

uncharacterized LOC107929117

uncharacterized LOC107942678

uncharacterized LOC107927760

uncharacterized LOC125587712

uncharacterized LOC125597752

uncharacterized LOC106431796

uncharacterized LOC102609149

uncharacterized LOC101245884

uncharacterized LOC102604673

uncharacterized LOC107816309

uncharacterized LOC107778449

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2
gma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00620	Pyruvate metabolism	7
bra01200	Carbon metabolism	7
bra00010	Glycolysis / Gluconeogenesis	6
bra00020	Citrate cycle (TCA cycle)	5
bra00785	Lipoic acid metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra00920	Sulfur metabolism	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2
ghi04141	Protein processing in endoplasmic reticulum	2
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00061	Fatty acid biosynthesis	2
ghi00071	Fatty acid degradation	2
ghi01212	Fatty acid metabolism	2
ghi04146	Peroxisome	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	4
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	3
nta03015	mRNA surveillance pathway	2
nta03018	RNA degradation	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	2
nta03018	RNA degradation	2
nta03013	Nucleocytoplasmic transport	2
nta03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

7498073

7473411

100809860

821823

827141

103834482

103868344

103869032

100257987

107929117

107942678

107927760

125587712

125597752

106431796

102609149

101245884

102604673

107816309

107778449

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7498073 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7498073 (ppo-u.5 coexpression data)


Species	ppo	gma	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	sbi	cre	mtr	tae	zma	osa	bdi	hvu
Paralog	4	2	2	3	1	3	3	1	1	1	2	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7498073 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7498073 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**