ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-r.6	101247787	AT-hook motif nuclear-localized protein 1
sly-u.5	101247787	AT-hook motif nuclear-localized protein 1
sly-u.5	101260750	AT-hook motif nuclear-localized protein 1
sly-u.5	101268706	AT-hook motif nuclear-localized protein 1
sly-u.5	101246253	AT-hook motif nuclear-localized protein 3-like
sot-r.1	102580329	AT-hook motif nuclear-localized protein 1-like
sot-r.1	102578251	AT-hook motif nuclear-localized protein 1-like
nta-r.1	107773749	AT-hook motif nuclear-localized protein 1-like
nta-r.1	107773777	AT-hook motif nuclear-localized protein 1
nta-r.1	107774234	AT-hook motif nuclear-localized protein 1
ath-u.5	AHL1	AT-hook motif nuclear-localized protein 1
ath-u.5	AT4G00200	AT hook motif DNA-binding family protein
ath-u.5	AT4G22770	AT hook motif DNA-binding family protein
gma-u.5	100803208	AT-hook motif nuclear-localized protein 7
gma-u.5	100776862	AT-hook motif nuclear-localized protein 6
gma-u.5	100801730	AT-hook motif nuclear-localized protein 1
bra-r.6	103836939	AT-hook motif nuclear-localized protein 7
bra-r.6	103853493	AT-hook motif nuclear-localized protein 1
bra-r.6	103860329	AT-hook motif nuclear-localized protein 2
vvi-u.5	100244375	AT-hook motif nuclear-localized protein 1
vvi-u.5	100262627	AT-hook motif nuclear-localized protein 1
vvi-u.5	100254941	AT-hook motif nuclear-localized protein 1
ppo-u.5	7482139	AT-hook motif nuclear-localized protein 6
ppo-u.5	7464863	AT-hook motif nuclear-localized protein 1
mtr-u.5	11408694	AT-hook motif nuclear-localized protein 1
mtr-u.5	25501022	AT-hook motif nuclear-localized protein 7
mtr-u.5	11422923	AT-hook motif nuclear-localized protein 6
ghi-r.1	107924447	AT-hook motif nuclear-localized protein 1
ghi-r.1	107922756	AT-hook motif nuclear-localized protein 1
ghi-r.1	107920687	AT-hook motif nuclear-localized protein 1
bna-r.1	125590074	AT-hook motif nuclear-localized protein 2-like
cit-r.1	102622810	AT-hook motif nuclear-localized protein 3
cit-r.1	102628010	hypothetical protein
cit-r.1	102613375	AT-hook motif nuclear-localized protein 1
osa-u.5	4344529	AT-hook motif nuclear-localized protein 1
zma-u.5	100272943	DNA-binding protein
tae-r.2	123167718	AT-hook motif nuclear-localized protein 1
tae-r.2	123160221	AT-hook motif nuclear-localized protein 1
tae-r.2	123147513	AT-hook motif nuclear-localized protein 1
hvu-r.1	123410818	AT-hook motif nuclear-localized protein 1-like
sbi-r.1	8066110	AT-hook motif nuclear-localized protein 1
bdi-r.1	100824915	AT-hook motif nuclear-localized protein 1

Top 50 coexpressed genes to 101247787 (sly-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101247787 (sly-r.6 coexpression data)

CoexMap"101247787"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003680 [list] [network] minor groove of adenine-thymine-rich DNA binding

(31 genes)

IEA

Protein

XP_004234164.1 [sequence] [blastp]
XP_010317470.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, mito 1, plas 1, mito_plas 1	(predict for XP_004234164.1)
nucl 9, mito 1, plas 1, mito_plas 1	(predict for XP_010317470.1)

Subcellular
localization
TargetP

other 9	(predict for XP_004234164.1)
other 9	(predict for XP_010317470.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-r.6 for 101247787	sly-u.5 for 101247787	sly-u.5 for 101260750	sly-u.5 for 101268706	sly-u.5 for 101246253	sot-r.1 for 102580329	sot-r.1 for 102578251	nta-r.1 for 107773749	nta-r.1 for 107773777	nta-r.1 for 107774234	ath-u.5 for AHL1	ath-u.5 for AT4G00200	ath-u.5 for AT4G22770	gma-u.5 for 100803208	gma-u.5 for 100776862	gma-u.5 for 100801730	bra-r.6 for 103836939	bra-r.6 for 103853493	bra-r.6 for 103860329	vvi-u.5 for 100244375	vvi-u.5 for 100262627	vvi-u.5 for 100254941	ppo-u.5 for 7482139	ppo-u.5 for 7464863	mtr-u.5 for 11408694	mtr-u.5 for 25501022	mtr-u.5 for 11422923	ghi-r.1 for 107924447	ghi-r.1 for 107922756	ghi-r.1 for 107920687	bna-r.1 for 125590074	cit-r.1 for 102622810	cit-r.1 for 102628010	cit-r.1 for 102613375	osa-u.5 for 4344529	zma-u.5 for 100272943	tae-r.2 for 123167718	tae-r.2 for 123160221	tae-r.2 for 123147513	hvu-r.1 for 123410818	sbi-r.1 for 8066110	bdi-r.1 for 100824915

Ortholog

Ortholog ID: 1396

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

AHL1

Function^*