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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-r.6   101249690   ribosome biogenesis protein RLP24-like 
 sly-u.5   101249690   ribosome biogenesis protein RLP24-like 
 sot-r.1   107062559   uncharacterized LOC107062559 
 sot-r.1   102582594   probable ribosome biogenesis protein RLP24 
 nta-r.1   107778004   putative ribosome biogenesis protein RLP24 
 nta-r.1   107774195   putative ribosome biogenesis protein RLP24 
 nta-r.1   107768240   putative ribosome biogenesis protein RLP24 
 ath-u.5   AT2G44860   Ribosomal protein L24e family protein 
 gma-u.5   100799024   probable ribosome biogenesis protein RLP24 
 gma-u.5   100793564   probable ribosome biogenesis protein RLP24 
 gma-u.5   100778077   probable ribosome biogenesis protein RLP24 
 bra-r.6   103863996   probable ribosome biogenesis protein RLP24 
 bra-r.6   103850179   probable ribosome biogenesis protein RLP24 
 vvi-u.5   100250021   probable ribosome biogenesis protein RLP24 
 vvi-u.5   100263161   probable ribosome biogenesis protein RLP24 
 ppo-u.5   18097984   probable ribosome biogenesis protein RLP24 
 mtr-u.5   25487519   probable ribosome biogenesis protein RLP24 
 mtr-u.5   11421120   probable ribosome biogenesis protein RLP24 
 ghi-r.1   107897889   probable ribosome biogenesis protein RLP24 
 ghi-r.1   107897164   probable ribosome biogenesis protein RLP24 
 ghi-r.1   107912342   probable ribosome biogenesis protein RLP24 
 bna-r.1   106356663   probable ribosome biogenesis protein RLP24 
 bna-r.1   106404586   probable ribosome biogenesis protein RLP24 
 bna-r.1   106391025   probable ribosome biogenesis protein RLP24 
 cit-r.1   102610147   probable ribosome biogenesis protein RLP24 
 osa-u.5   4342953   probable ribosome biogenesis protein RLP24 
 osa-u.5   4323991   probable ribosome biogenesis protein RLP24 
 zma-u.5   100285083   ribosome biogenesis protein RLP24 
 tae-r.2   123102119   probable ribosome biogenesis protein RLP24 
 tae-r.2   123110256   probable ribosome biogenesis protein RLP24 
 tae-r.2   123119300   probable ribosome biogenesis protein RLP24 
 hvu-r.1   123451992   probable ribosome biogenesis protein RLP24 
 sbi-r.1   8074595   probable ribosome biogenesis protein RLP24 
 bdi-r.1   100826075   probable ribosome biogenesis protein RLP24 
 bdi-r.1   100830511   probable ribosome biogenesis protein RLP24 
 cre-r.1   CHLRE_07g325712v5   uncharacterized protein 

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Top 50 coexpressed genes to 101249690 (sly-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101249690 (sly-r.6 coexpression data)

CoexMap"101249690"


slyLOC101249690 | Entrez gene ID : 101249690      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 2 3 1 3 2 2 1 2 3 3 1 2 1 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03010 [list] [network] Ribosome (6225 genes)
GO BP
GO:0042273 [list] [network] ribosomal large subunit biogenesis  (92 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (194 genes)  IEA  
GO MF
Protein NP_001294920.1 [sequence] [blastp]
NP_001294921.1 [sequence] [blastp]
NP_001294922.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 2,  mito 1,  vacu 1  (predict for NP_001294920.1)
cyto 4,  nucl 3,  chlo 2,  mito 1,  vacu 1  (predict for NP_001294921.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001294922.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001294920.1)
other 5  (predict for NP_001294921.1)
other 5  (predict for NP_001294922.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-r.6
for
101249690
sly-u.5
for
101249690
sot-r.1
for
107062559
sot-r.1
for
102582594
nta-r.1
for
107778004
nta-r.1
for
107774195
nta-r.1
for
107768240
ath-u.5
for
AT2G44860
gma-u.5
for
100799024
gma-u.5
for
100793564
gma-u.5
for
100778077
bra-r.6
for
103863996
bra-r.6
for
103850179
vvi-u.5
for
100250021
vvi-u.5
for
100263161
ppo-u.5
for
18097984
mtr-u.5
for
25487519
mtr-u.5
for
11421120
ghi-r.1
for
107897889
ghi-r.1
for
107897164
ghi-r.1
for
107912342
bna-r.1
for
106356663
bna-r.1
for
106404586
bna-r.1
for
106391025
cit-r.1
for
102610147
osa-u.5
for
4342953
osa-u.5
for
4323991
zma-u.5
for
100285083
tae-r.2
for
123102119
tae-r.2
for
123110256
tae-r.2
for
123119300
hvu-r.1
for
123451992
sbi-r.1
for
8074595
bdi-r.1
for
100826075
bdi-r.1
for
100830511
cre-r.1
for
CHLRE_07g325712v5


Ortholog ID: 3564
Species sly sot sot nta nta nta ath gma gma gma bra bra vvi vvi ppo mtr mtr ghi ghi ghi bna bna bna cit osa osa zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC101249690 LOC107062559 LOC102582594 LOC107778004 LOC107768240 LOC107783657 AT2G44860 LOC100799024 LOC100778077 LOC100306000 LOC103863996 LOC103850179 LOC100250021 LOC100263161 LOC18097984 LOC25487519 LOC11421120 LOC107944961 LOC107905291 LOC107888911 LOC106356663 LOC106404586 LOC106446165 LOC102610147 LOC4342953 LOC4323991 LOC100285083 LOC123102119 LOC123110256 LOC123119300 LOC123451992 LOC8074595 LOC100826075 LOC100830511 CHLRE_07g325712v5
Function* ribosome biogenesis protein RLP24-like uncharacterized LOC107062559 probable ribosome biogenesis protein RLP24 putative ribosome biogenesis protein RLP24 putative ribosome biogenesis protein RLP24 putative ribosome biogenesis protein RLP24 Ribosomal protein L24e family protein probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 putative ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 probable ribosome biogenesis protein RLP24 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 11
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03008 Ribosome biogenesis in eukaryotes 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
bra03040 Spliceosome 3
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 3
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
bna03018 RNA degradation 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
osa03020 RNA polymerase 3
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101249690 107062559 102582594 107778004 107768240 107783657 819095 100799024 100778077 100306000 103863996 103850179 100250021 100263161 18097984 25487519 11421120 107944961 107905291 107888911 106356663 106404586 106446165 102610147 4342953 4323991 100285083 123102119 123110256 123119300 123451992 8074595 100826075 100830511 5728434
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