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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-r.6   101257707   uncharacterized LOC101257707 
 sly-u.5   101257707   uncharacterized LOC101257707 
 sly-m.5   101257707   uncharacterized LOC101257707 
 sot-r.1   102581687   ubiquinone biosynthesis monooxygenase COQ6, mitochondrial 
 nta-r.1   107821407   uncharacterized LOC107821407 
 nta-r.1   142182671   uncharacterized LOC142182671 
 ath-u.5   AT3G24200   FAD/NAD(P)-binding oxidoreductase family protein 
 gma-u.5   100807800   ubiquinone biosynthesis monooxygenase COQ6, mitochondrial 
 bra-r.6   103828683   ubiquinone biosynthesis monooxygenase COQ6, mitochondrial 
 vvi-u.5   100248856   uncharacterized LOC100248856 
 ppo-u.5   7496073   uncharacterized LOC7496073 
 mtr-u.5   11427532   ubiquinone biosynthesis monooxygenase COQ6, mitochondrial 
 mtr-u.5   11446703   ubiquinone biosynthesis monooxygenase COQ6, mitochondrial 
 ghi-r.1   107890577   ubiquinone biosynthesis monooxygenase COQ6, mitochondrial 
 ghi-r.1   107942321   ubiquinone biosynthesis monooxygenase COQ6, mitochondrial 
 ghi-r.1   121220784   ubiquinone biosynthesis monooxygenase COQ6, mitochondrial 
 bna-r.1   125575143   ubiquinone biosynthesis monooxygenase COQ6, mitochondrial-like 
 bna-r.1   106453309   ubiquinone biosynthesis monooxygenase COQ6, mitochondrial-like 
 bna-r.1   106445454   ubiquinone biosynthesis monooxygenase COQ6, mitochondrial 
 cit-r.1   102630098   uncharacterized LOC102630098 
 osa-u.5   4334721   uncharacterized LOC4334721 
 zma-u.5   100382613   uncharacterized LOC100382613 
 tae-r.2   123087733   ubiquinone biosynthesis monooxygenase COQ6, mitochondrial 
 tae-r.2   123084128   ubiquinone biosynthesis monooxygenase COQ6, mitochondrial-like 
 tae-r.2   123114196   ubiquinone biosynthesis monooxygenase COQ6, mitochondrial 
 hvu-r.1   123394970   ubiquinone biosynthesis monooxygenase COQ6, mitochondrial 
 sbi-r.1   8080177   ubiquinone biosynthesis monooxygenase COQ6, mitochondrial 
 bdi-r.1   100823739   ubiquinone biosynthesis monooxygenase COQ6, mitochondrial 
 cre-r.1   CHLRE_02g112850v5   uncharacterized protein 

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Top 50 coexpressed genes to 101257707 (sly-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101257707 (sly-r.6 coexpression data)

CoexMap"101257707"


slyLOC101257707 | Entrez gene ID : 101257707      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 1 2 1 1 1 1 1 2 3 3 1 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (50 genes)
sly01240 [list] [network] Biosynthesis of cofactors (247 genes)
GO BP
GO:0016120 [list] [network] carotene biosynthetic process  (3 genes)  IEA  
GO:0016123 [list] [network] xanthophyll biosynthetic process  (4 genes)  IEA  
GO:0006744 [list] [network] ubiquinone biosynthetic process  (11 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (608 genes)  IEA  
GO MF
GO:0008681 [list] [network] 2-octaprenyl-6-methoxyphenol hydroxylase activity  (1 genes)  IEA  
GO:0016709 [list] [network] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen  (39 genes)  IEA  
GO:0071949 [list] [network] FAD binding  (72 genes)  IEA  
Protein XP_004247834.1 [sequence] [blastp]
XP_010326815.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  E.R. 1  (predict for XP_004247834.1)
chlo 6,  mito 2,  E.R. 1  (predict for XP_010326815.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_004247834.1)
mito 7  (predict for XP_010326815.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-r.6
for
101257707
sly-u.5
for
101257707
sly-m.5
for
101257707
sot-r.1
for
102581687
nta-r.1
for
107821407
nta-r.1
for
142182671
ath-u.5
for
AT3G24200
gma-u.5
for
100807800
bra-r.6
for
103828683
vvi-u.5
for
100248856
ppo-u.5
for
7496073
mtr-u.5
for
11427532
mtr-u.5
for
11446703
ghi-r.1
for
107890577
ghi-r.1
for
107942321
ghi-r.1
for
121220784
bna-r.1
for
125575143
bna-r.1
for
106453309
bna-r.1
for
106445454
cit-r.1
for
102630098
osa-u.5
for
4334721
zma-u.5
for
100382613
tae-r.2
for
123087733
tae-r.2
for
123084128
tae-r.2
for
123114196
hvu-r.1
for
123394970
sbi-r.1
for
8080177
bdi-r.1
for
100823739
cre-r.1
for
CHLRE_02g112850v5


Ortholog ID: 7595
Species sly sot nta nta ath gma bra vvi ppo mtr mtr ghi ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC101257707 LOC102581687 LOC107821407 LOC142182671 AT3G24200 LOC100807800 LOC103828683 LOC100248856 LOC7496073 LOC11427532 LOC11446703 LOC107890577 LOC107942321 LOC121220784 LOC125575143 LOC106453309 LOC106445454 LOC102630098 LOC4334721 LOC100382613 LOC123087733 LOC123084128 LOC123114196 LOC123394970 LOC8080177 LOC100823739 CHLRE_02g112850v5
Function* uncharacterized LOC101257707 ubiquinone biosynthesis monooxygenase COQ6, mitochondrial uncharacterized LOC107821407 uncharacterized LOC142182671 FAD/NAD(P)-binding oxidoreductase family protein ubiquinone biosynthesis monooxygenase COQ6, mitochondrial ubiquinone biosynthesis monooxygenase COQ6, mitochondrial uncharacterized LOC100248856 uncharacterized LOC7496073 ubiquinone biosynthesis monooxygenase COQ6, mitochondrial ubiquinone biosynthesis monooxygenase COQ6, mitochondrial ubiquinone biosynthesis monooxygenase COQ6, mitochondrial ubiquinone biosynthesis monooxygenase COQ6, mitochondrial ubiquinone biosynthesis monooxygenase COQ6, mitochondrial ubiquinone biosynthesis monooxygenase COQ6, mitochondrial-like ubiquinone biosynthesis monooxygenase COQ6, mitochondrial-like ubiquinone biosynthesis monooxygenase COQ6, mitochondrial uncharacterized LOC102630098 uncharacterized LOC4334721 uncharacterized LOC100382613 ubiquinone biosynthesis monooxygenase COQ6, mitochondrial ubiquinone biosynthesis monooxygenase COQ6, mitochondrial-like ubiquinone biosynthesis monooxygenase COQ6, mitochondrial ubiquinone biosynthesis monooxygenase COQ6, mitochondrial ubiquinone biosynthesis monooxygenase COQ6, mitochondrial ubiquinone biosynthesis monooxygenase COQ6, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 7
sly03040 Spliceosome 3
sly04144 Endocytosis 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 4
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 7
nta03008 Ribosome biogenesis in eukaryotes 2
nta03083 Polycomb repressive complex 2
nta04712 Circadian rhythm - plant 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta03050 Proteasome 3
nta04016 MAPK signaling pathway - plant 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 3
ath03083 Polycomb repressive complex 2
ath03008 Ribosome biogenesis in eukaryotes 2
ath03015 mRNA surveillance pathway 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 6
bra04145 Phagosome 5
bra04142 Lysosome 2
bra04144 Endocytosis 2
bra00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 4
mtr00240 Pyrimidine metabolism 2
mtr00670 One carbon pool by folate 2
mtr00790 Folate biosynthesis 2
mtr01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00900 Terpenoid backbone biosynthesis 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 4
cit01240 Biosynthesis of cofactors 2
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa00910 Nitrogen metabolism 3
osa01310 Nitrogen cycle 3
osa00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 2
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 4
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 7
bdi03018 RNA degradation 3
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 3
cre03410 Base excision repair 3
cre03420 Nucleotide excision repair 3
cre03430 Mismatch repair 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101257707 102581687 107821407 142182671 822006 100807800 103828683 100248856 7496073 11427532 11446703 107890577 107942321 121220784 125575143 106453309 106445454 102630098 4334721 100382613 123087733 123084128 123114196 123394970 8080177 100823739 5725232
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