Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-r.6   MBP20   MADS-box protein MBP20 
 sly-u.5   MBP20   MADS-box protein MBP20 
 sot-r.1   102602089   truncated transcription factor CAULIFLOWER A 
 nta-r.1   107767794   agamous-like MADS-box protein FUL-L 
 nta-r.1   107789626   agamous-like MADS-box protein FUL-L 

close


Top 50 coexpressed genes to MBP20 (sly-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to MBP20 (sly-r.6 coexpression data)

CoexMap"104645706"


slyMBP20 | Entrez gene ID : 104645706    
Species sly sot nta osa cit ath bna ppo ghi bdi sbi gma mtr bra tae hvu vvi zma cre
Paralog 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (133 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (282 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (326 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (499 genes)  IEA  
Protein NP_001361312.1 [sequence] [blastp]
XP_069149233.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001361312.1)
nucl 6,  extr 1,  chlo 1,  plas 1,  pero 1,  cysk 1,  cysk_plas 1  (predict for XP_069149233.1)
Subcellular
localization
TargetP
other 5,  mito 5  (predict for NP_001361312.1)
other 8  (predict for XP_069149233.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-r.6
for
MBP20
sly-u.5
for
MBP20
sot-r.1
for
102602089
nta-r.1
for
107767794
nta-r.1
for
107789626


Ortholog ID: 24945
Species sly sot nta nta
Symbol MBP20 LOC102602089 LOC107767794 LOC107789626
Function* MADS-box protein MBP20 truncated transcription factor CAULIFLOWER A agamous-like MADS-box protein FUL-L agamous-like MADS-box protein FUL-L
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 104645706 102602089 107767794 107789626
The preparation time of this page was 0.1 [sec].