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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-r.6   PGcat   polygalacturonase 
 sly-u.5   PGcat   polygalacturonase 
 sly-m.5   PGcat   polygalacturonase 
 sly-u.5   101256371   probable polygalacturonase At3g15720 
 sot-r.1   102602941   probable polygalacturonase At3g15720 
 nta-r.1   107761023   putative polygalacturonase At3g15720 
 nta-r.1   107767548   putative polygalacturonase At3g15720 
 nta-r.1   107776714   putative polygalacturonase At3g15720 
 mtr-u.5   11431564   probable polygalacturonase At1g80170 
 mtr-u.5   25495857   probable polygalacturonase At3g15720 
 tae-r.2   123049740   polygalacturonase ADPG1-like 
 tae-r.2   123041778   polygalacturonase ADPG1-like 

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Top 50 coexpressed genes to PGcat (sly-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PGcat (sly-r.6 coexpression data)

CoexMap"543587"


slyPGcat | Entrez gene ID : 543587      
Species sly sot nta mtr tae cre vvi bra ath ppo hvu bna bdi osa gma zma cit ghi sbi
Paralog 4 1 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00040 [list] [network] Pentose and glucuronate interconversions (127 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (703 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (56 genes)  IEA  
Protein NP_001234200.2 [sequence] [blastp]
XP_019070574.1 [sequence] [blastp]
XP_069143724.1 [sequence] [blastp]
XP_069143725.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  E.R. 1,  E.R._plas 1,  plas 1,  cyto 1,  extr 1,  cysk 1  (predict for NP_001234200.2)
nucl 4,  cyto 1,  E.R._plas 1,  plas 1,  E.R. 1,  mito 1,  extr 1,  cysk 1,  cyto_pero 1  (predict for XP_019070574.1)
nucl 5,  E.R. 1,  E.R._plas 1,  plas 1,  cyto 1,  extr 1,  cysk 1  (predict for XP_069143724.1)
nucl 5,  E.R. 1,  E.R._plas 1,  plas 1,  cyto 1,  extr 1,  cysk 1  (predict for XP_069143725.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001234200.2)
scret 9  (predict for XP_019070574.1)
scret 9  (predict for XP_069143724.1)
scret 9  (predict for XP_069143725.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-r.6
for
PGcat
sly-u.5
for
PGcat
sly-m.5
for
PGcat
sly-u.5
for
101256371
sot-r.1
for
102602941
nta-r.1
for
107761023
nta-r.1
for
107767548
nta-r.1
for
107776714
mtr-u.5
for
11431564
mtr-u.5
for
25495857
tae-r.2
for
123049740
tae-r.2
for
123041778


Ortholog ID: 2099
Species sly sly sot nta nta nta gma mtr tae
Symbol PGcat LOC101256371 LOC102602941 LOC107761023 LOC107776714 LOC107770857 LOC100787465 LOC25495857 LOC123049740
Function* polygalacturonase probable polygalacturonase At3g15720 probable polygalacturonase At3g15720 putative polygalacturonase At3g15720 putative polygalacturonase At3g15720 putative polygalacturonase At3g15720 probable polygalacturonase At1g80170 probable polygalacturonase At3g15720 polygalacturonase ADPG1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00511 Other glycan degradation 2
sly04142 Lysosome 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00920 Sulfur metabolism 3
sly01320 Sulfur cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01212 Fatty acid metabolism 3
sot00061 Fatty acid biosynthesis 2
sot00780 Biotin metabolism 2
sot01240 Biosynthesis of cofactors 2
sot00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 3
nta04075 Plant hormone signal transduction 3
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 543587 101256371 102602941 107761023 107776714 107770857 100787465 25495857 123049740
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