ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-r.6	CBF1	C-repeat-binding factor-1
sly-u.5	CBF1	C-repeat-binding factor-1
sly-m.5	CBF1	C-repeat-binding factor-1
sly-u.5	101263186	dehydration-responsive element-binding protein 1A
sly-u.5	109119806	dehydration-responsive element-binding protein 1A
sot-r.1	CBF3	AP2 domain CBF protein
sot-r.1	102577439	CBF2
nta-r.1	107778127	dehydration-responsive element-binding protein 1B-like
nta-r.1	142164254	dehydration-responsive element-binding protein 1A-like
nta-r.1	142164255	dehydration-responsive element-binding protein 1A-like
ath-u.5	DDF1	Integrase-type DNA-binding superfamily protein
ath-u.5	CBF2	C-repeat/DRE binding factor 2
ath-u.5	DREB1A	dehydration response element B1A
gma-u.5	100789097	dehydration-responsive element-binding protein 1E
bra-r.6	103857283	dehydration-responsive element-binding protein 1B
bra-r.6	103861560	dehydration-responsive element-binding protein 1C
bra-r.6	103838306	dehydration-responsive element-binding protein 1E
vvi-u.5	CBF4	CBF4 transcription factor
ghi-r.1	107936392	dehydration-responsive element-binding protein 1E
ghi-r.1	107933919	dehydration-responsive element-binding protein 1A-like
ghi-r.1	107946998	dehydration-responsive element-binding protein 1B-like
bna-r.1	106399526	dehydration-responsive element-binding protein 1F
bna-r.1	106360182	dehydration-responsive element-binding protein 1F
bna-r.1	106359887	dehydration-responsive element-binding protein 1B-like
cit-r.1	102610170	dehydration-responsive element-binding protein 1B-like
cit-r.1	102618196	dehydration-responsive element-binding protein 1D
cit-r.1	102622031	dehydration-responsive element-binding protein 1B-like
osa-u.5	4330306	dehydration-responsive element-binding protein 1G-like
osa-u.5	4336721	dehydration-responsive element-binding protein 1E-like
zma-u.5	100281239	dehydration-responsive element-binding protein 1D
zma-u.5	100284491	dehydration-responsive element-binding protein 1A
sbi-r.1	8076037	dehydration-responsive element-binding protein 1G
sbi-r.1	8060409	dehydration-responsive element-binding protein 1E
bdi-r.1	100845084	dehydration-responsive element-binding protein 1G

Annotation

functional annotation

KEGG

GO BP

GO:0006355 [list] [network] regulation of DNA-templated transcription

(1608 genes)

IEA

GO CC

GO MF

GO:0003700 [list] [network] DNA-binding transcription factor activity	(1125 genes)	IEA
GO:0003677 [list] [network] DNA binding	(1883 genes)	IEA

Protein

NP_001234123.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for NP_001234123.1)

Subcellular
localization
TargetP

chlo 7, other 3

(predict for NP_001234123.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-r.6 for CBF1	sly-u.5 for CBF1	sly-m.5 for CBF1	sly-u.5 for 101263186	sly-u.5 for 109119806	sot-r.1 for CBF3	sot-r.1 for 102577439	nta-r.1 for 107778127	nta-r.1 for 142164254	nta-r.1 for 142164255	ath-u.5 for DDF1	ath-u.5 for CBF2	ath-u.5 for DREB1A	gma-u.5 for 100789097	bra-r.6 for 103857283	bra-r.6 for 103861560	bra-r.6 for 103838306	vvi-u.5 for CBF4	ghi-r.1 for 107936392	ghi-r.1 for 107933919	ghi-r.1 for 107946998	bna-r.1 for 106399526	bna-r.1 for 106360182	bna-r.1 for 106359887	cit-r.1 for 102610170	cit-r.1 for 102618196	cit-r.1 for 102622031	osa-u.5 for 4330306	osa-u.5 for 4336721	zma-u.5 for 100281239	zma-u.5 for 100284491	sbi-r.1 for 8076037	sbi-r.1 for 8060409	bdi-r.1 for 100845084